AMCG00001284


Basic Information

Item Value
gene id AMCG00001284
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 23031304 ~ 23033499 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001284
ATGGTCTTGGATTTGGAGTcagaaaagcagagagagaaatgcaggaGACAAACGCCCATTCTGAGATTTATTTGTCCTAAAGCTCCCTGTGACTATAGCGAGTGGGGCCCCACTTGGATCCTCATCCCCTTTGTCTATCTGCTGGCATTCACTTTAGGCTCCCTAGGGAACGGCCTTGTCCTGTGGGTGTACTTGGGACATAACAGTGACTGGAGGGTCTGTGCAGAACCCCAACACCAGTCATCATGCATCCCCACACCCTGCCCTCCTTCAAGGCACCTATGCCCCACTCCCCAGCATTCTCCGGCCTTGCGCCCAGGCCGCTCCCTCACTGATGTCCTCATCGCCAGCCTGGCAGCAGCAGACCTGGCTTTTGTGCTGACCCTGCCTCTGTGGGCAGCATACACCGCATTGGGCTATGACTGGCCCTTTGGTCTTCCTCTCTGCAAAGCCAGCAGCTACCTGGTGGCCCTCAACATGTATGCTAGTGTTTTCTTCTTAACCGGGCTCAGCGTGGAGCGCTACTGTGTCATCGCTGGCCACTTCAGGGGTGCTGGAGGGAGAGGGCTGAGGAGGAGGCGGGGACTTTGGGTAGTGGTAGGCATCTGGGCCATGGCAGGGCTTTTGGCCTTACCTGCCCTGGTGTTGAGGACTGTGAGGGAGTTGGACCCCAGGGAGGTGATGGAAGACATGTGGGGGGAGATAGAAGAAGAAGACCTCAGCTCTGGCTCCCACGTATACGCCTGTGAGATGGACTATTCAGTCTTGATTTTCACTGATGACCCTGATGAGAGGGAACGATTGCATCTGCTGTGGACAGCCATTTTTGGGTTCAAATCCACCATCCTGGGCTTCCTGCTCCCCTTGGCTGTTCTTCTGCTGTGCTACTGCTCTCTGGGGCATCTCCTTTCCCGCCACTTCGGGAAGGGCCCACGGGCTGACCGGCGGAGGCAACGGCGTCTCCTGCGGGTCATTGCCACCCTTGTCCTGGCCTTCTTCCTGTGCTGGCTACCCTACCATGCCAACAAGAGCTTGGCCATCCTCACTGAGCTGGAGGTCATCCCCTTCTACTGCCCCTTTGACAGGGTTTTAGTTCTTGCCCACCCTTATGCCACCTGCCTGGCGTACGTAAACAGCTGCCTAAACCCACTTCTCTATGCCTGCTGTGACCCCGCTTTCCGACGCCGCTGCAAATCTCTATGGAGACGGTGCCCAGGCAGAGGGGGGcaacaggaggaggaggaggaggaggaggaggaggaagaggaggaggaggccagCAAGAGCTCAGCAGTTACTCAGCAGACTGGGTCACGTAGCAATACAGAAAATGGCAAGGGAGCGGAGAGGGAGCTGGTACAAGGCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001284 True 1368 mRNA 0.57 2 23031304 23033499

Neighbor

gene id symbol gene type direction distance location
AMCG00001279 NA coding upstream 278448 22646113 ~ 22752856 (+)
AMCG00001276 NA coding upstream 424049 22584027 ~ 22607255 (+)
AMCG00001275 ercc3,LOC107706662 coding upstream 465684 22551140 ~ 22565620 (+)
AMCG00001277 ercc3,LOC107660024,LOC107705543,LOC107584836,LOC107677608,LOC107706662 coding upstream 489051 22540350 ~ 22542253 (+)
AMCG00001272 NA coding upstream 580414 22384720 ~ 22450890 (+)
AMCG00001285 NA coding downstream 67408 23100907 ~ 23119955 (+)
AMCG00001294 ino80d,LOC106582458 coding downstream 688324 23721823 ~ 23759069 (+)
AMCG00001300 NA coding downstream 869829 23903328 ~ 23913809 (+)
AMCG00001298 NA coding downstream 914950 23948449 ~ 23990082 (+)
AMCG00001297 tmem198a coding downstream 1038930 24072429 ~ 24090849 (+)
G130166 NA non-coding upstream 226246 22799097 ~ 22805058 (+)
G130160 NA non-coding upstream 406101 22624958 ~ 22625203 (+)
G130144 NA non-coding upstream 415147 22615284 ~ 22616157 (+)
G130153 NA non-coding upstream 448340 22582698 ~ 22582964 (+)
G130152 NA non-coding upstream 448683 22582316 ~ 22582621 (+)
G130346 NA non-coding downstream 181438 23214937 ~ 23217500 (+)
G130348 NA non-coding downstream 190533 23224032 ~ 23224597 (+)
G130365 LOC107575789,LOC100846954 non-coding downstream 247312 23280811 ~ 23281334 (+)
G130461 NA non-coding downstream 695506 23729005 ~ 23729229 (+)
G130492 NA non-coding downstream 822221 23855720 ~ 23856116 (+)
AMCG00001278 ercc3,LOC107706662 other upstream 500468 22500035 ~ 22530836 (+)
AMCG00001269 trak2,LOC107582328,LOC106573853 other upstream 792650 22189908 ~ 22238654 (+)
AMCG00001260 NA other upstream 1038972 21971299 ~ 21992332 (+)
G129913 NA other upstream 1754425 21271384 ~ 21276879 (+)
G129877 NA other upstream 1952434 21077135 ~ 21078870 (+)
G130335 NA other downstream 132764 23166263 ~ 23166656 (+)
AMCG00001292 ndufs1,LOC107555450,LOC107748553 other downstream 531652 23565151 ~ 23685121 (+)
AMCG00001312 tuba4a,tuba8l4,tba1a,si:ch211-114n24.6,LOC108251627,LOC107714908 other downstream 1391066 24424565 ~ 24446233 (+)
G130616 si:ch211-114n24.6,LOC107581306,LOC108436424,LOC101061790,LOC103034569 other downstream 1400294 24433793 ~ 24454385 (+)
AMCG00001315 NA other downstream 1550680 24584179 ~ 24606472 (+)

Expression


Co-expression Network