AMCG00003523


Basic Information

Item Value
gene id AMCG00003523
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 7408545 ~ 7410129 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003523
ATGGAGGGTACTGGATCTGAAGCTCATAATAGAAACTCTTTAACACTGGACCTTGGTGGAGAAATCGACAGCAAAGAAAATGAGGAAACATCTCAACAGGAGGTTGCAAGCCAGCCCCCAGAAATCTTTTTCCAAGAGGAAAACATCGACCTGGAAGCCTTTGTCACGCCACTAGAAGAAAGCCATTCTGAGAATTTCATGGATAAACTTAATGACCAGATGATGGAAAGTGTCATGATATCAGATTCCCCAAACAACAGTGAAGATGATGTTGGCCAGATGGAATCTCTCCTGGAGCAGTTTGAAGAGACCGAGGACTTTGTGTCAAAAGAGACAGAATACACAGACGTGAAACCCGTTACAGATGTGGAGGAGGCCGCACTTGAAAGTAAGGGAGAGTTGGAAGAAATGCCACCGGTCACCCCAACACTAGATGAGAAACAGGTGGATGTGGAAGAAGAATCAGAAGAGGATGAAAGGAAAATAACCCCTATCCAGCCAACAGAGGAAGACACTGGTCTTGACAATGGCAAGAGCCAGGAACCGGAATCAAGTACCAGCCATGAGCCATCAAAGGAGGAATCGATTCCAGTTTGCACCATTTTTAGTCAAAGTAATCAGCCTAAAACACAGACCCAGTCCTTGATACCTGATGGCTTTGAGCCTGCCTTGGTCAAGTCTCCCAGCTTTGGTAGTGTCACTGAAACCCCAAATAAGCTGGCTCCCTTAGTTTGCCAGCCCAGCCCCAGTCTTAGCAAGTTTTTCGCAGACAACAGCCACTCCAACCCAGCCTCTGACTTTTTTGATTCTTTCACGACTTCCTCCTCTTTCATATCTGTCAGCAACCCCAATGCAAACACCTCCCATCCACCGGTCCCTGAACGCCAGCTTTCAGTTTCCTCACTGCCTGCTCCTGTGCCTCAGGAGCCTGGCACTCCTACCTTCTTCTTTGGCCCCGCTCCCCCAGAATCCCCCGCACAGCCTGGATCGGCAGAAGTGGCGCCCCCTTTCTCCCAGATGCAAGCCGCCTTCTCGGGGAGTGACGACCCCTTCGCCACAGCTTTAAACATGAGCGAAATTGACCGGAGGTTCGATGCGTGGCTCCCCTCAGAGGAAACGAGGAAGGTCTTGATTTCTGTCGCCACTCAACAGTACAGTCCCATTTTCATTGAAAAAGAGAAGCTTTCCATGCCTGGGCTGAAGTTTGACAATCTTCAGggagaTGCAGTTAAAGATCTTATGCTGAGATTTTTGGGAGAACAGGCAGCAATGAAAAGGCAGGTTTTGACGGCAAATTCTGTGGAGCAGTCCTTTGTTGGACTGAAGCAGTTAATT

Function

GO:

id name namespace
GO:0003678 DNA helicase activity molecular_function
GO:0043138 3'-5' DNA helicase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003523 True 1335 mRNA 0.49 2 7408545 7410129

Neighbor

gene id symbol gene type direction distance location
AMCG00003516 NA coding upstream 361142 7045216 ~ 7047403 (+)
AMCG00003513 NA coding upstream 367636 7039811 ~ 7040909 (+)
AMCG00003507 NA coding upstream 538280 6827929 ~ 6870265 (+)
AMCG00003506 NA coding upstream 582835 6818616 ~ 6825710 (+)
AMCG00003505 NA coding upstream 672175 6723530 ~ 6736370 (+)
AMCG00003522 trappc12 coding downstream 12674 7422803 ~ 7438447 (+)
AMCG00003529 NA coding downstream 43282 7453411 ~ 7459476 (+)
AMCG00003527 NA coding downstream 56792 7466921 ~ 7482206 (+)
AMCG00003521 NA coding downstream 95334 7505463 ~ 7514410 (+)
AMCG00003525 NA coding downstream 107922 7518051 ~ 7531125 (+)
G1187 NA non-coding upstream 43068 7364944 ~ 7365477 (+)
G1146 NA non-coding upstream 334936 7073404 ~ 7073609 (+)
G990 NA non-coding upstream 1422151 5986038 ~ 5986394 (+)
G983 NA non-coding upstream 1452725 5955604 ~ 5955820 (+)
G960 NA non-coding upstream 1578800 5829459 ~ 5829745 (+)
G1218 NA non-coding downstream 79316 7489445 ~ 7489881 (+)
G1241 NA non-coding downstream 113732 7523861 ~ 7750465 (+)
G1242 NA non-coding downstream 116730 7526859 ~ 7528458 (+)
G1253 NA non-coding downstream 386322 7796451 ~ 7796854 (+)
G1271 NA non-coding downstream 865633 8275762 ~ 8276983 (+)
G1012 NA other upstream 913640 6487692 ~ 6494905 (+)
AMCG00003480 NA other upstream 2073793 5303450 ~ 5334752 (+)
AMCG00003469 NA other upstream 2886145 4514031 ~ 4522400 (+)
AMCG00003473 NA other upstream 2953403 4452564 ~ 4455142 (+)
AMCG00003524 rps7,LOC107668222 other downstream 87911 7498040 ~ 7504015 (+)
AMCG00003534 id2,LOC106566577 other downstream 1238996 8649125 ~ 8652470 (+)
AMCG00003541 asap2,LOC106566627 other downstream 1490327 8900456 ~ 8941751 (+)
AMCG00003544 NA other downstream 1665761 9075890 ~ 9106765 (+)
AMCG00003551 NA other downstream 1845699 9255828 ~ 9263468 (+)

Expression


Co-expression Network