AMCG00003527


Basic Information

Item Value
gene id AMCG00003527
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 7466921 ~ 7482206 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00003527
GCAGAGAAGAAGCACATGATCCTTCAGGAACATGATCGCTTTAAGAAGCACTACAAACGCTACATGACCCACAAGCACACCTACGAGCTGGAGCAGCGATTTCTGAAAACCGCCAAAAAGAAGGTGGAGCAGCTGAGCTGGGCGCTGAGCGGACGGGAGGACGGCCCCCCCAACACCACCTTCATCAAAGATGCCACGCAGGAGCTCCTCAGGAGCATCCTCATCTGCTCTAGTTTGGAGTCCCAGGAGTGGGCTGGGCTGAGCTCTGAGAACAGCGATGACATCACAGTGACCAGCATTGATatgctcagtcagtcagtcagtcaggctggctggctggctggcaggcAGCTAGAGAGTGAAGATCTGTTTGAAACTGAGGATGACTTGCATGGCAGAGTGAAGAGAATCCCAGGACCTGATGACGATGGGTTACTCTGGGATGAATACACTCCTCTGGATCTTCACCGATCTCATGGAGATGATGTTAAAATTGATAATTTTCCTCCACAGTCAGGTGTAGATGGTGATGAAAGTAACATGGCTTGGCATGACTTGGCACATGACCATGAGGAAGCATGGGAGTCTCTACAAGATCCTGTAGCAGTGTCTAACTGGGGTAACATGGTGAACAGAAATGTTGCCCCTAATGCCTTCTACATCAATGAGGATGCTGATCTTGATCCTGATGGTTCTAATCCTATAAAAGATGTGATTCAAAATGGTGATTTGGAGGGGGCTGACTCTGAGGATGTAGGTTCAGATTGGCTTGATCCGTCCACTTTACCAAGAGATGGTGTGGCGAGCATTCTGCTGCTCAGGGAGACTGAGGCTGTTGCTCCTCATGTTGCAGTTTCTCACCATGATAATGAGATGAATGATGCCTCCTTGGAGGATGAGGAGGCTGGCTCTGACCTGCATTTAAATGAGCAAGGTGATGAGGCCAATGCTGGTGTCCTCCCAGATGCTGAAGGTTCAGACTCTGAGCCTGAGGGAGAGAACATGACTCAAGTTCCAGAGCCAAGTGTTGCTTGTGGGAATGGCAGCATGTTGATCCAGTTCTCCTTGCAGCGTTACACTCGGATCTTCCTGCAGAAAGCTGGAAGGAGACTACTCCCAGTTCTGAAGCTCCCCAGGTCTTGTAAGCACACAGTGAGGCGAAGCAACAGCAGCCTGGTGCTGATTGCATCCTTCGAGGGCTGTTATGTATGGAATTTGCAGAAAGACAATGAACTCCATGAAGCGCTGACCCTCCAATACTATGACCGGGTCCTGAAGAGGCCATTTGTGGTCACAGTGTCATGCCCAGTGACCACCACTCCAACGGCAGTCCCTCCCAAAGGCCTGTCCATCTCCTGCAGTGATGTGTGCATGACTGTGCAGCTACCTGCTGGTCCCCTATCGGCTGTGAAAATCTTGGACTCCTCCAAAACCTTGGTCCCTGTACTCCAGACCCCCAAGTTCTGTGGCTATGCCTTGGTGAAGAAGGATGGCAAGAACATGCTTACCATCCCATACACTGCCTGTGATGTAAAGCTTGTGGAGAAGAGGTACATTATCCAGGTGGTTTATGTGACTAGTGGGGGAGAACGAGCAGAGATCCAGGTATCATGCCCTTATAAACGACTTGTGCCAAAGCAAGGATGCCAGATCCCCAAGAGACAGCAGGTATCTTGTGGTCCCAAGAGAATAGGCTCCAAAGCCTGCCGTGCCAAGGGTTGCTGTGTAGACTTGGACACTGCCCACTGCTACTATCCTCTGGAAGaatgcactgctgACAGGCACTTTGTCTTTGTGGTCCATCGTACCATCACTGTGAACCCTGCCTCCTTGGTGATTGCTGGCAACAAGTCCTGCACCCCAGTCATCTGCACCGCAGACTTCGCAGTCTTCAAGTTCCCTGTGACTGGCTGTGGAACCCATGCATTTGTGGTTGGGGAGACTACCATCTACCTGGCTGAAGTAATTGCCTTGGCCAGACTCAATAGCCTGAACTATGGAGTCATTACTAGGGACAGTCCCTTCAGGCTACTGGTGGAGTGTCGCTATGCAGAGGGGAACTTGGCCAGCACTGGATACCTGGTGAAAAACCCTTCCCTTCCCAATGCAATTCTGTCCCATGGAGTGTTTGGGGTGCGACTCAGGATTGCCACGGATGACACCTACAGCCGGTTTTACCCTCAGTACCACCGGCCCCTGCGGCTCTTGCTGGGCAGGCCTGTCTTCTTGGAGGTGCAGCTGCTGAATGTCCCTGACCCCAGCCTGGTGCTGCTGGTGCACTACTGTGTTGCCTACCCCCGCTCTGCACAGGCTGTCTGGGTGTTGGTCTATGAAGGctGCCCCAACCCTCTGGACTATGGTCACACCTCCACCCTGCATGTCAACCACAAGCAGCAACTGCCCAAACACCACCGTCGCTTTGAGATCCGCACCTTCCAGTTCATGGACCATGTGACTCACCGCTACCTCAATGAGGAGATCTACTTCATGTGCTCCACGGAAGTCTGCTCCCCATCAGCCAAGAAGTGTGTGGAAGGATGCTTTGATGGGCGCAAGCTCCCAGTAGTTGAGGACCCCAATGTTGACAAGCGCTGTACAAGGAAGCCTTGCCCAGGAAAGGCCAAGAGATCTGCAGGACTCCCAGCACTGTGACTCCAGTAAGTATGCACTGGAGCACTCCTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00003527 True 2683 mRNA 0.52 20 7466921 7482206

Neighbor

gene id symbol gene type direction distance location
AMCG00003529 NA coding upstream 7445 7453411 ~ 7459476 (+)
AMCG00003522 trappc12 coding upstream 28474 7422803 ~ 7438447 (+)
AMCG00003523 NA coding upstream 56792 7408545 ~ 7410129 (+)
AMCG00003516 NA coding upstream 419518 7045216 ~ 7047403 (+)
AMCG00003513 NA coding upstream 426012 7039811 ~ 7040909 (+)
AMCG00003521 NA coding downstream 23257 7505463 ~ 7514410 (+)
AMCG00003525 NA coding downstream 35845 7518051 ~ 7531125 (+)
AMCG00003526 NA coding downstream 50347 7532553 ~ 7547554 (+)
AMCG00003530 LOC108258189,LOC103368564,LOC106533618 coding downstream 496569 7978775 ~ 7980197 (+)
AMCG00003532 rsad2 coding downstream 802621 8284827 ~ 8292218 (+)
G1187 NA non-coding upstream 101444 7364944 ~ 7365477 (+)
G1146 NA non-coding upstream 393312 7073404 ~ 7073609 (+)
G990 NA non-coding upstream 1480527 5986038 ~ 5986394 (+)
G983 NA non-coding upstream 1511101 5955604 ~ 5955820 (+)
G960 NA non-coding upstream 1637176 5829459 ~ 5829745 (+)
G1218 NA non-coding downstream 7239 7489445 ~ 7489881 (+)
G1241 NA non-coding downstream 41655 7523861 ~ 7750465 (+)
G1242 NA non-coding downstream 44653 7526859 ~ 7528458 (+)
G1253 NA non-coding downstream 314245 7796451 ~ 7796854 (+)
G1271 NA non-coding downstream 793556 8275762 ~ 8276983 (+)
G1012 NA other upstream 972016 6487692 ~ 6494905 (+)
AMCG00003480 NA other upstream 2132169 5303450 ~ 5334752 (+)
AMCG00003469 NA other upstream 2944521 4514031 ~ 4522400 (+)
AMCG00003473 NA other upstream 3011779 4452564 ~ 4455142 (+)
AMCG00003524 rps7,LOC107668222 other downstream 15834 7498040 ~ 7504015 (+)
AMCG00003534 id2,LOC106566577 other downstream 1166919 8649125 ~ 8652470 (+)
AMCG00003541 asap2,LOC106566627 other downstream 1418250 8900456 ~ 8941751 (+)
AMCG00003544 NA other downstream 1593684 9075890 ~ 9106765 (+)
AMCG00003551 NA other downstream 1773622 9255828 ~ 9263468 (+)

Expression


Co-expression Network