G83904


Basic Information

Item Value
gene id G83904
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030130.1
NCBI id CM030130.1
chromosome length 39556810
location 6660729 ~ 6662819 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU104679
GTTTAagttgccatttatttatttccgaGCAGCGCTATTGACATGAAAATAAACCTCATTTatgacatttacaataaaaagaaaatagatcaAATCTGTCCAGTACCAAACAGTACAACATTTCACAATAGGTATCGGAGTAAGGAGATAACATCCAAAACTTGCACAGCAACTTTATTTACAATGACATTTGGAATATCATCATCAGTGACGTCTGAAATGGTTATCAATCAAATACGAACATAATGCAGTCATAatgattattttgtgtatgactacatttgaattaaatgcaattgGCAGGATACAAATCTATTTTGTAAAGGTTCTAGATTAACAACAATGGGAGTGTTACATGTTAGCGTTAAGTAAAGAGACTGAATCTAGTAGTGGGAATATTTTAACTGTTACTTGCTTTGATATTGTAGCagttatacaaaatattgtcagagttaaatactgttttaagaATAAATTACAGATGAAGTGTGTCAGATAAAGAATACATCAGTGAATGACAATAAATGATGCATGCAATACCGTACTATCAAACAAGGATTTCAAAATGATACTGTTGAAGCCTTTAGGGTGAATGACAGAAATGCATAGATGAACGGGAGATTAAATCAAGTAATAGTGATAATCTTTTGGGTCCTGTGAACATCTATTAACAAGGTGATATTTACTGACCATTTACTAATAAAAGGGAATAACTAATTATGAATGAAAACCAATGCCTATATGCATATTATCACTCCATTTTAAAACGTAAACCTTAACAACCCCACACTTAAGATCCATCAGTCAGACAACTTTTCCACTTCCAATATCAGGcaatgaaacactttttttcagCATATAAGGTATACACAAAGTAgagttcagaaaataaaataaaatacaaatataaatgccaCTCTTTTATCTTAGATAAGAGGATTTGAGGGAAGTGATATTccaatacacattttgtagttCAGTATGTTTCAGAAAGGAAAGAACAATAAGAAAAACGTTTTTAAAGAAATCCCAAACTTACAACAAAACTATCTTATTTCGTTGTTGTTGTGGAGAATCACTAGGGAACTGTAAAGATGGAAATCAGGTTGGAGGTTCCCTTAGaagaggctgctgtctgtcctCGTGGTTTTATTCCTCTCAGTTGCCCTCCATTTCTATCCTTGgcttgaggaagaaaaaaaaaagctgacaaTACCATCTTCTCCATCCAGCTGCTGCTAATATTTCATCTCTCCCACAAGTGCCTCGGCAGACCAGTTTAATAATAGTCCTGTTAACTATCTAATAATAGTCGAGGCTGACCTAGTAAAGCGCGTCTTCATACATGTCAGTCCGCAGACAGAACAGGATGCCCCCCCCCAGCATGAAGATGGTCGAACCCCAGCCCAGGCCGTAGCCCCAGTTGAACTCGTGGTAGGTCTGCAGGACTGTGCCGTCGATGAACTTGATGGGATACAGGACCAGAGCGCAGGCTTGCAGGACCACTGGGGAAGGAAAGAGAACTGAGCTCAGCGCACATTTATACTCAAATTCAGCAAAAGGCCGCACATAATCCCCGGACACGTTAACAGATTGCTTGAAACAGTGCTGCCAAGACTGCACTCTGGAGAGGAGTCTACGCGCTGGCCAAGGCTTCCCCTGCTCTCCCTGATTCCCTCTGAGGATATCGCCAGCTTATAACCTGCTGTGTTTCACAGGCTGTGATTGTGCTGGAAGTGTCATGTGCTGGACGTCAGACCGAAGCAGAACATGCTTTCTGACATCCTTTATATGTATGATATGAAGAACTGTTATATTTCAAACACAGTATAATGTGTAACATATCCATCATAAATGTCTCAAAGTGTTCCAGTAAAAGTCACTGATCGATTAACTGGGTGGATTCATTATTGCCTTGTCTGTGTGATTATATTTAAGGTAAACTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU104679 True 1948 lncRNA 0.38 2 6660729 6662819

Neighbor

gene id symbol gene type direction distance location
AMCG00021137 NA coding upstream 17667 6637721 ~ 6643062 (+)
AMCG00021138 LOC103395702,LOC102211599,LOC101478708,LOC102313148,LOC105902075 coding upstream 45085 6586140 ~ 6615644 (+)
AMCG00021139 pgk1 coding upstream 77528 6573176 ~ 6583201 (+)
AMCG00021131 NA coding upstream 88344 6549111 ~ 6572385 (+)
AMCG00021132 pgrmc1,LOC107726794,LOC107713219,LOC107697348 coding upstream 127414 6530980 ~ 6533315 (+)
AMCG00021140 dcx coding downstream 54139 6716958 ~ 6724763 (+)
AMCG00021142 NA coding downstream 126316 6789135 ~ 6811229 (+)
AMCG00021143 kif4a coding downstream 231184 6894003 ~ 6910414 (+)
AMCG00021144 NA coding downstream 252998 6915817 ~ 6924589 (+)
AMCG00021146 NA coding downstream 293893 6956712 ~ 6957563 (+)
G83900 NA non-coding upstream 17206 6643182 ~ 6643523 (+)
G83752 NA non-coding upstream 1842400 4818097 ~ 4818329 (+)
G83741 NA non-coding upstream 1929785 4634736 ~ 4730944 (+)
G83716 NA non-coding upstream 2368365 4292126 ~ 4292364 (+)
G83710 NA non-coding upstream 2374129 4280108 ~ 4286600 (+)
G83914 NA non-coding downstream 16384 6679203 ~ 6681917 (+)
G83976 NA non-coding downstream 388378 7051197 ~ 7056132 (+)
G83983 NA non-coding downstream 422399 7085218 ~ 7088239 (+)
G84049 NA non-coding downstream 734241 7397060 ~ 7398518 (+)
G84061 NA non-coding downstream 763112 7425931 ~ 7426347 (+)
AMCG00021133 NA other upstream 114128 6544234 ~ 6546601 (+)
AMCG00021114 NA other upstream 2426932 4202711 ~ 4233797 (+)
AMCG00021113 vma21,LOC107565438,LOC107741184,LOC107680358,LOC108442053 other upstream 2531356 4127070 ~ 4129373 (+)
G83624 NA other upstream 2861946 3797841 ~ 3798783 (+)
AMCG00021076 NA other upstream 4430582 2209482 ~ 2230147 (+)
AMCG00021150 fundc2,LOC106603170,LOC107661711 other downstream 449178 7111997 ~ 7121237 (+)
AMCG00021180 NA other downstream 1377351 8040170 ~ 8043299 (+)
G84301 NA other downstream 1968908 8631727 ~ 8633410 (+)
G84425 NA other downstream 2753448 9416267 ~ 9423419 (+)
AMCG00021240 LOC107742636 other downstream 3807244 10470063 ~ 10719327 (+)

Expression


Co-expression Network