Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU134092 |
| length | 469 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 2 |
| gene id | G90564 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056711.1 |
| NCBI id | CM032080.1 |
| chromosome length | 25085836 |
| location | 3852210 ~ 3855543 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0010927 | cellular component assembly involved in morphogenesis | biological_process |
| GO:0055001 | muscle cell development | biological_process |
| GO:0055002 | striated muscle cell development | biological_process |
| GO:0031032 | actomyosin structure organization | biological_process |
| GO:0030239 | myofibril assembly | biological_process |
| GO:0032989 | cellular component morphogenesis | biological_process |
| id | description |
|---|---|
| ko00500 | Starch and sucrose metabolism |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU134029 | lncRNA | upstream | 282718 | 3569068 ~ 3569492 (+) | True | G90514 |
| TU133855 | lncRNA | upstream | 308558 | 3502068 ~ 3543652 (+) | True | G90388 |
| TU133848 | lncRNA | upstream | 362419 | 3469447 ~ 3489791 (+) | True | G90381 |
| TU133844 | lncRNA | upstream | 401725 | 3450173 ~ 3450485 (+) | True | G90378 |
| TU133839 | lncRNA | upstream | 448456 | 3401964 ~ 3403754 (+) | True | G90373 |
| TU134099 | lncRNA | downstream | 17216 | 3872759 ~ 3877501 (+) | True | G90571 |
| TU134100 | lncRNA | downstream | 17216 | 3872759 ~ 3894955 (+) | False | G90571 |
| TU134102 | lncRNA | downstream | 97057 | 3952600 ~ 3955913 (+) | False | G90573 |
| TU134103 | lncRNA | downstream | 97057 | 3952600 ~ 3953707 (+) | True | G90573 |
| TU134104 | lncRNA | downstream | 97057 | 3952600 ~ 4049612 (+) | False | G90573 |
| XM_043256022.1 | mRNA | upstream | 19660 | 3809058 ~ 3832550 (+) | True | pkdcca |
| XM_043255416.1 | mRNA | upstream | 93075 | 3729913 ~ 3759135 (+) | True | ubr2 |
| XM_043255862.1 | mRNA | upstream | 122742 | 3717296 ~ 3729468 (+) | True | si:ch73-193i2.2 |
| XM_043255861.1 | mRNA | upstream | 134916 | 3713833 ~ 3717294 (+) | True | LOC122356793 |
| XM_043255957.1 | mRNA | upstream | 141212 | 3620406 ~ 3710998 (+) | True | prkn |
| XM_043254839.1 | mRNA | downstream | 26043 | 3881586 ~ 3948955 (+) | True | LOC122356299 |
| XM_043255728.1 | mRNA | downstream | 470095 | 4325638 ~ 4348853 (+) | True | plekhh2 |
| XM_043255864.1 | mRNA | downstream | 504992 | 4360535 ~ 4362542 (+) | True | LOC122356796 |
| XM_043255865.1 | mRNA | downstream | 508480 | 4364023 ~ 4373553 (+) | True | si:ch73-105b23.6 |
| XM_043256129.1 | mRNA | downstream | 517671 | 4373214 ~ 4377830 (+) | True | LOC122356983 |
| XR_006252399.1 | other | upstream | 22469 | 3809053 ~ 3829741 (+) | False | pkdcca |
| XR_006252394.1 | other | upstream | 138447 | 3620406 ~ 3713763 (+) | False | prkn |
| TU133843 | other | upstream | 402193 | 3449401 ~ 3450017 (+) | True | G90377 |
| TU133812 | other | upstream | 571213 | 3277837 ~ 3280997 (+) | False | G90348 |
| TU133811 | other | upstream | 571213 | 3279202 ~ 3280997 (+) | True | G90348 |
| unassigned_transcript_1924 | other | downstream | 216263 | 4071806 ~ 4071899 (+) | True | trnai-uau_4 |
| TU134239 | other | downstream | 326956 | 4182499 ~ 4244041 (+) | False | G90660 |
| TU134245 | other | downstream | 326956 | 4182499 ~ 4244041 (+) | False | G90660 |
| TU134242 | other | downstream | 385589 | 4241132 ~ 4244041 (+) | True | G90660 |
| TU134595 | other | downstream | 1136784 | 4992327 ~ 4997896 (+) | False | si:ch73-49p17.1 |
