Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043255819.1 |
| length | 1406 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 14 |
| gene id | fancl |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056711.1 |
| NCBI id | CM032080.1 |
| chromosome length | 25085836 |
| location | 10051087 ~ 10067172 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0048599 | oocyte development | biological_process |
| GO:0016567 | protein ubiquitination | biological_process |
| GO:0006281 | DNA repair | biological_process |
| GO:0043240 | Fanconi anaemia nuclear complex | cellular_component |
| GO:0004842 | ubiquitin-protein transferase activity | molecular_function |
| GO:0008270 | zinc ion binding | molecular_function |
| id | description |
|---|---|
| K10606 | FANCL, PHF9; E3 ubiquitin-protein ligase FANCL |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_006252389.1 | lncRNA | upstream | 1645 | 10044781 ~ 10049442 (+) | True | LOC122356803 |
| TU136807 | lncRNA | upstream | 320085 | 9730725 ~ 9731002 (+) | True | G92434 |
| TU136805 | lncRNA | upstream | 323120 | 9724396 ~ 9727967 (+) | True | G92432 |
| TU136704 | lncRNA | upstream | 456810 | 9592419 ~ 9594277 (+) | True | G92361 |
| XR_006252391.1 | lncRNA | upstream | 467416 | 9582555 ~ 9583671 (+) | False | LOC122356835 |
| TU136894 | lncRNA | downstream | 1316 | 10068488 ~ 10070783 (+) | True | G92513 |
| TU136909 | lncRNA | downstream | 97387 | 10164559 ~ 10165656 (+) | True | G92524 |
| TU136950 | lncRNA | downstream | 168744 | 10235916 ~ 10249725 (+) | True | LOC122356813 |
| TU136954 | lncRNA | downstream | 181516 | 10248688 ~ 10249725 (+) | False | LOC122356813 |
| TU136969 | lncRNA | downstream | 208412 | 10275584 ~ 10276178 (+) | True | G92552 |
| XM_043255010.1 | mRNA | upstream | 383249 | 9615027 ~ 9667838 (+) | True | bcl11aa |
| XM_043256233.1 | mRNA | upstream | 482560 | 9567617 ~ 9568527 (+) | True | neurog3 |
| XM_043254617.1 | mRNA | upstream | 498592 | 9549733 ~ 9552495 (+) | True | pcbd1 |
| XM_043255605.1 | mRNA | upstream | 559681 | 9482211 ~ 9491406 (+) | True | LOC122356643 |
| XM_043255351.1 | mRNA | upstream | 577553 | 9457560 ~ 9473534 (+) | False | inpp5f |
| XM_043255884.1 | mRNA | downstream | 137941 | 10205113 ~ 10249725 (+) | False | LOC122356813 |
| XM_043254689.1 | mRNA | downstream | 227034 | 10294206 ~ 10297714 (+) | True | LOC122356189 |
| XM_043255573.1 | mRNA | downstream | 246242 | 10313414 ~ 10333604 (+) | False | ldb1a |
| XM_043255583.1 | mRNA | downstream | 246242 | 10313414 ~ 10333604 (+) | False | ldb1a |
| XM_043255580.1 | mRNA | downstream | 246242 | 10313414 ~ 10333604 (+) | False | ldb1a |
| TU136388 | other | upstream | 886973 | 9161561 ~ 9164114 (+) | True | zgc:153981 |
| TU136262 | other | upstream | 1310998 | 8739073 ~ 8740089 (+) | False | sf3b5 |
| XR_006252358.1 | other | upstream | 1368035 | 8666268 ~ 8683052 (+) | False | pcnx2 |
| TU135961 | other | upstream | 1740263 | 8306486 ~ 8310824 (+) | True | G91833 |
| XR_006252298.1 | other | upstream | 2169604 | 7858698 ~ 7881483 (+) | False | zswim8 |
| TU136946 | other | downstream | 168744 | 10235916 ~ 10249725 (+) | False | LOC122356813 |
| XR_006252428.1 | other | downstream | 261972 | 10329144 ~ 10329279 (+) | True | LOC122357143 |
| XR_006252423.1 | other | downstream | 351650 | 10418822 ~ 10419594 (+) | False | ly6pge |
| TU137252 | other | downstream | 897701 | 10964873 ~ 10968914 (+) | True | eif4ebp2 |
| TU137332 | other | downstream | 1146354 | 11213526 ~ 11215087 (+) | False | G92772 |
