RNA id: XM_043256030.1


Basic Information

Item Value
RNA id XM_043256030.1
length 9998
RNA type mRNA
GC content 0.47
exon number 46
gene id eys
representative True

Chromosome Information

Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 14630594 ~ 14787104 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ATATTTGCTTACAAAACATCTACATGCTTGTTTCCCAATCAAAACCTACAGTTCAGAGATCCAGAAAAGCTGAAGAAACTAATCAAGTGGCTAAATAAAGAAAGAGTCAAGATTGAGGAAAGACAAACATGAGAAACCCAGACCTAGTTATCATTGTCTTGCTCCTTGGCTGTGTAATAGATGGTACCGTCTACAGCCAGGTAACCTGCCGCAGGGCCACGTCTCGTGAATGGCACACTCAACCGAAGAACATCAGCGTGAGGTGGACCCTCATGGAGAACACCTGCAGCAGCTTGACCCAGTGCTGGAacagacaaacagaaacaaatggaGGCGTGTGGACAACTGGGCCATATCACCTTCCTCAGCTTTGCCCACTAGAATTTCAACTCGGAGATGTGATGTTTGTTTCTGCTGACAGAACGCTGGAACAATACGGTATCCACCTAATCAATGTGTCCAAAGATGAGTTTGAAAACTGCTTGACTTTAGAGCCACGTAAGGAGCAGTTGGTGTTTGCCAACAGTATTAATGGCACTTTGCAAGTGGAATCGAAATGGCTGACGCCTGGAATGAATTACTTGACGGTCATTCGTAGAGGCAGTAGTCATCTGTGTAGGCTTGGCCTACGCATTGCACTTCTGGTAAAGCCTCAGCACTGCCAGAGCTCACCTCTTCTCCGTCTGTGTTCGGGAAATGGTGAAtgcaaaactacatttaaagaTGATGCATTTAGCTGTCAGTGCCACAAACACTTTTCAGGACGTTACTGTGAGAACATTGATGGATGCTATGAACAGCCATGCATAAATGGAGGCACCTGCCTGAGCAAGAGAACAGCCTACACAGATTTCCCATCTTATGAATGTCTTTGCCCAGCTCCGTTCACAGGTGTCAACTGCTCTGCAATCTCTGGATATCAAAATTGCAGTAAAGGATGCAAGGAAGGAGCTTGCGTACAAGTCTCCTCAACTTCCTACAGATGTGAATGTTTCACAGGATATACAGGTACTTACTGTGAGCGAAAGAGGCTCCTCTGTGATTCAAACCCTTGCTGGAATGACGGTCGCTGTGAGGAGACTGCTAATGGATATGTTTGCACATGCCCAGGGGGTTTCACAGGCCTCAACTGTGAGACCACCACCGAGGCTGACAGCTACTGCAAGTCTAACAGATGTCAACTGGACGAAACTTGCGCCACAGACAAACTTAATTTCACATGCATTTGTGTAGACCCGGAGTGCTCGGAGCAGGCAGAGGTGTGCGGCGCTTGGCCCTGTTTCAACGGTGGCATCTGTGTAGTTCAGAATGGCCAATATCATTGCAGATGCCGACGAGGTTTTTCCGGAAAGAATTGTGAAGAAATAATTGACTTCTGCAAGCTGCTCAGCATTAACTGCCTGAATGAGGGATTGTGTCTCAGCTTAGTCGGAGGATATAATTGTCTCTGTGCACCAGGATGGACGGGGGAGTTTTGTCAGTACTTGGATAACGCATGCTTAGCTTATCCAAACAGATGCTTGAACGGAGCTACTTGCATCAGTATGAGTCAGCCAACTGCACCCCCGCACTATATGTGCACCTGTCTCCCTGGATACACAGGACGCTACTGTGAGGCTGAAGCAAATGAGTGCGATTCCAGTCCCTGTCAGCACCAGGGAACATGCACTGACTTTGTTGGATACTACAAATGCGCCTGTCCTTCAGGATACACTGGGGTTGACTGTGAGGTTGACGTAAATGCCTGCGTGCTTCCAAATGCCGCCTGTCCCCCTGGAACATTCTGTGTGGACTTGCCAGGTGACCAGCTCCATATATGTCACACTCGGTGCCCTCACTATCTACAGCCATGTGCCAATGGAGGACATTGTGTCCTTAACAACATCACCAGTTACAGTTGTGTTTGTGCACCTGGATGGACTGGGCCGACCTGCTTGGTCAACATAAATGAGTGTGTCCAGCACAGGTGTCAGAACAGAGCCACCTGCGTGGATGAGGTTGGTGGGTACAGTTGCCTTTGCGGTCACGGATATACTGGAGTCCACTGCGAACTTGACATTGACTTCTGCTCTGGACATCAGTGTTCAGAACACGCCGTCTGTCTGGACCAACAGCACAACTACACCTGTCACTGCATGCTGGGATATGAGGGAACGTTCTGTGAGCTTGAGACAGATGAATGCAAAAGTGCACCGTGCGCCAACGGTGCCACTTGCATTGATTTGGTGGCAGGTTATCAGTGCCTGTGTACTCCAGGATTTAAGGGTCGAACATGCTCAGAGAATATGAATGAGTGTTGGTCCAGACCTTGCCTTAATGGGGGCACCTGCATTGATCTGGCCAATGACTACATTTGTATCTGTCTACTCGGATTCACTGGACATGACTGCTCCATGCCGGCTACGGGCTGCACTTCCAACCCATGCGATGCGGAGGGCACTTCCATGTGCGAAGAGCAGCAGGGCGGTTTCAAGTGCGCATGTCACCATGGCTATACGGGCCCATTTTGTGAAACTTCCATCAGTCACTGTGTTGAAGGACTGTGTCATCACGGATCAAAGTGTGTGGATTTCCCGCTGGGCTTCGTGTGTGAATGTTTGCCTGGGTTACGAGGACGATTCTGTGAGGTAAACATTGATGACTGTCTGGATAAGCCTTGTGGTGCTCTCAGTATCTGTAAAGATGGTATCAATGCCTATGACTGTTTCTGTGCTCCTGGGTTCGTCGGTAATAACTGCGAGATTGAAGTAAATGAGTGTCTTAGTCAACCCTGTCAGAATGGCGCTTCCTGCTCAGATGAGCTTAACTCTTTCAGCTGTCTCTGTCCTGCCGGGACAACAGgcagtttatgtgaaataaacatAGATGAATGCCAGTCATCACCATGCGTGAACAACGGCACTTGTTTGGACCTCTCCGAtggctttaaatgcatttgccCTTCAGGTTTCTCTGGTCCTGAGTGCTCACTGGATGTTGATGAGTGTATCTCATATCCCTGTAAGAATGGAGGCACCTGCATTGACCAACCGGGTAATTACTACTGCCGATGCACGGCTCCATTTAAAGGGATTAACTGCGAGTTGCTGCCCTGTGAGGCCGTTAATCCGTGTGATAACGGGGCAGAATGCGTGGAGGATTCTGATCCAGTCCTCTTCCCTCTGGGTTTCCGGTGCCGATGTCGCCAGGGTTTCACGGGGCCCCGCTGTGAGATCAACATAGACGAGTGCAGCTCCAACCCCTGCCTGCACGGCTTCTGTTACGACGCTGTGGATGGTTTTTACTGCTTGTGTAACCCTGGTTACGCTGGAATAAGATGCGAGCAGGACATCAATGACTGTGTCGGCAACATGTGTGAAAACAACTCAACTTGCGTGGACCTCCATCTGAGTTACGACTGCCTCTGTCTGCCCGGCTGGGAGGGGGAGTTCTGTCAAAGGGAGACCGATGAATGTTCATCAAACCCCTGTAAAAACAACGCCACCTGTACAGACCTCCTCAACGCTTACAGGTGTACGTGTCCACGTGGCTGGACCGGCCTGGATTGTGGAGTGGATGTGAAGGAATGTTCTTCCTCTCCCTGCCTGAACGGAGCACATTGTGTGGAGTCTGACATCCCAGGGGAGTTCTCCTGCACCTGCCCGCCCTTCTTTACCGGCCTGCTCTGTGAACAGGCCCACGACCCCTGCGACCTGCCGCATAACCCCTGCCTGCACAACTCCACCTGCCGTGCCAAGTCAGATGGAACCGCCCTCTGTGTTTGCCCTGTCGGGTTTGAGGGAACTCGCTGTGAAATTGATAGCGATGACTGTGTCTCAAGACCTTGTCAGAACCAAGGCCATTGTGTGGATGGGGTCAACAGTTACAGCTGTTTCTGTAAGCCAGGTTTCTCGGGCCAACGCTGTGAGGAAGACATCAACGAGTGTGCATCCAACCCCTGCCAGAACCAAGGCGTCTGCCGAGACCTTGTGAACGGTTTCCAGTGCAACTGTGTCGCCGGATATTTTGGAACCCTTTGCAACCTGGACGTAAACGAATGTGAAGCTTCCCCCTGCCTTCATGACTCTGTGTGCATCAACAAACCTGGGGGATTCATATGTGTCTGCAGTGCTGGCTTCTCAGGTAAATGGTGCGAGCTGAACGTGGATGAGTGCGGATCTAATCCGTGCCGAAACAACGGGAGGTGCATTGACGGCCTTAACGGTTACCAGTGTGTGTGCTCCAGAGGTTTCATGGGCTATCACTGTGAGAGAAACATTGATGAGTGCTCATCCAACCCCTGTGTTCATGGGAGTTGCCTGGATGAAATGGATGCATACAGCTGTCAGTGTGAGGTTGGATGGACCGGTCACAGATGTGAGATCAACGTTAATGAGTGTGAGACCTATCCTTGTCTTAATGGCGGCTCGTGTGTGGATCTTCAGGacaaatatgcatgcatatgcgCTGAAGGTTTCACTGGGAAGACCTGTGAGATTGACcagagtgtgtgtctgcagaCGTCTCTGaatttctctctgtgtttcaaTGGAGGGACGTGTGTGGATGGACCAGGGACCAACTTCACATGCAGctgcCTGCCAGGTTTTGTGGGAGATTTCTGTGAGGTAGAGATGAATGAATGTTGCTCTGAGCCGTGCTTTCACGGGGCCATCTGCCAGGACCTCGTCAATGGCTACCAATGTCACTGTCGACCAGGTTGGACAGGCCTTCACTGTGAAGATGACATTAATGAGTGCTTGCTGCAACCATGCAACCAGGGAATGTGCATCCAGAATGAGCCTGGCCATGGCTACACCTGCTTCTGTCGGCCCGGATTTGTGggGGAAAACTGTGAATATAATTACAATGACTGCTTGATCCAATCATGCCCTGGTGGGTTTTCCTGTAAGGACAGCATCAACAATGTCAGCTGTGTCCCTGTAAAGACAGACACGTCTTCTGTTCCTCCCATCTCAGTCGTGTTGTGGAGAACCATCAGCCCCGACCTAAAGTTACAACCCACTTCAGCACCTGTGGAGAACTCGCTAAACACTGAGCTGCCGACAGATATTAGTTTTGGGAGATATTCTGGGAAGGCCTTTTTGGAGTTTGAGGGCATTGAAGTCGATGCCGCGTTCAATGTCACGGTGAGATTCCTGACTGAATCCAAGTACGGAACCCTGCTGTATTCGACCAGTGCCAAAAAAGCCACCTTCTTCATAAAACTCTACATTTCCAATGGAACGCTTTGGtatgactttttgtgcaacCAAAAGGAGGGAGTTCAGCGGATCAATACAGCACAGCAGGTTGCTGATGGAAATGAGCATGTGGTGCTTTTGAGACAATATCTTTCTCCTTGTGAAGCCGAAGTCACTGTTACAGGTCTTGGGACTGTCAGAAGTATTCCGAGCAATTACACATCAGCCGTGAGTTTACAGAGAACTGACCGTCTCTTCATAGGAGGACTTCCTCTTCGGTTTCTACCTCATAAAGAAGCTGAACCTTTCCACAACTACACCGGTTGCATTGAAATAATCGAAATTAATAAGCTCAGAGGATTCCGTGTGGACCAGGCTATTGCCAGGAACAATGTTGACAGCTGCAGGCCTCTCTGGCATCGTGACCCACCAGCAGACTCTACAGAACCGCCTCAGTTCATCACAGTAGAAACCACTCCGGATAGGCCTATCCCACCCACTCAGCCTTCACCTGTGTGTCCACAGGGGCTCTGTCTCAACGGTGGATCTTGCCGGCCCATTTTTCTACCCAGCGGAGCCTCGTCTTTCTTCTGTGACTGTCCCCTGCACTTCACAGGACGCCTGTGTGAACAAGatgCAACAATCTTTTTCCCTCGATTTGATGGTACCTCTTTCTTGGAGTTGCCATCTCTGACATCCCTGTTTCAGTCAGACATGCACTTTACAAGCCATTCCACTGAGAACAGGAGGACCATGTATTTGATGATGAAGAGCAAGACACCTCATGGTACTATTCTCTACTGCCGGGAGCAGAATTTTGGAGACCGTTTCCTCCATGTTTTTCTCCAGAATGGAAGACCGGTGGCCAGGTTGGGCTGCAGTGGTGTTCATGTTTTGACTGCAGCTGCTCCACAGAATATCAGGATCAACAGCTGGGTGCCAATTTTAGTGAGATATGCATTGCCGTCTCTTGACAATGACCGGCTCTGTATCATTGAGATAGCTGTTGCTAATGGAACTGCTAATCAGCAGCAGAAATATATGGATGAGCCTGTGTCAGAGGTGGTGTTTGGCCCCCTGTTCCTTGGTGGCGTTCCATCCCTCTCAGAGCTGCACCACAACAGTGGGAACGTCTCTGGCTTCATCGGCTGCATACGTGAACTGCAGATGGGCTCCAAAGAGCTGTTTGTGGTGGGGGAAGCAATCAGAGGCCAAAACATTCAGAACTGTGACTCTACAGTCTGCCAGCACAAACCCTGCCGCAATGGAGGAACCTGTATCAGTGATGCGGAGAACTGGTTCTGCGCGTGTCCTTCGCTCTACTCCGGTAAGCTGTGCCAGTTCACCGCCTGCGAGCGCAACCCGTGCGCGCGCGGCGCCACCTGCGTTCCCCAGACGCGTCTCGAAGCGGCGTGTCTTTGCCCCTACGGAAGGCGGGGTCTCCTCTGCGACGAGGCTGTCAGCATCACGCGGCCCAAGTTTAGTGGACTTGATGAATTTGGATCCTCATCCTATGTGGCTTATCCTTCTATTCCCAGTATGgatcatttttatgaattccACCTGAAGCTCACCTTTGTCAATAATGCCTCTGCTTTGAGAAACAACCTCATTCTCTTTTCTGGGCAAAAGGGACAAGGCATCAGTGGAGATGACTTCTTCGCGTTGGGGGTGCGCAACGGCAGAATTGTTCATAAGTATAATCTCGGCTCAGGTTTGGCTACAATTATCAGCGAGCGCCTGAACCCGAGGATCGGCATTCACACAGTGCACTTTGGAAGATATCTGAAAAACGGATGGCTGAAGGTTGATGGGCAGAAGAGGAGGATGGGTACATCCCCTGGTCCACTGGTGGGCTTGAACACCTTTAGTCAACTTTATGTGGGTGGATATGAAGAATACACACCTGAGCTATTGCCTGCGGGCTCTCGATTCCAGAACAGCTTTCAAGGCTGCATTTTTGATCTGCTGTTTCGGACGAGACGAGATGGGAAGTTTCATCCTCCGGGAGGGCCAGCGTCAGGACGTAATGTGGGGCAGTGTGGTGTTAATCCGTGCAGCCTGGTCGTCTGCCAGAACGGAGGCACCTGTGTGGACTCTGGATCCTCTGTGCACTGTCAATGTACGTTTGGATGGAAAGGTGCTCTTTGCTCAGAGAAAGTGTCGTTCTGTGATGCTGAGCACATCCCACCGCCTTTGTGCGCTCGCGGCGCCACCTGTGTGCCCCTTCCTGATGGATACACATGTCAGTGCCCCCTAGGCTCTGCTGGACTCTTCTGCCAGCAAGCTCTATCTATCACTGATCCTTTCTTCAGTGGGAACCAATCGTCTTGGATGTCATTTCCTCCCATCAACGTAAGGCACAGAACTCATCTGCAACTGCAGTTTCAAACTCTTTCACCGGAGGGCATCCTATTCTACGCCGCACGCTACTTGAGCAGTCGAACTGGTGATTTCCTCAGCGTATCCCTATCAGATGGATTTGTGCAGCTCCGCTATAATTTGGGAAATGAAACTATTGTATTACAGTCTCCAAAAAGTGTAGATGTGACCGGCGCAAGGTGGCACACAGTGAAGGCTGGTAGAGAAGGCAATCGAGGCTTCCTGATTCTGGACGATGGAGCCGTGATCAGGAACTCTTCGGAGGGCTCGACCGCTCTGGATGTCGgcacaaatattttcattggTGGTGTATCTTCCCTGAACACGGTATCTCTGGATGCAATGGAGAAGGACCCGGTGGGGTTCACCGGCGGCATTCGAGAGGTCATAGTCAACGGACGGGAACTTGAGCTTACAGAGACAGGTGCACTAGATGGAGCCAATGTCGGCGACTGGGACGGGACAGCTTGCGGGTATAAGGTTTGCTTAAACGGTGGCTACTGCCATCCAGAAGGCCTTTCTTCATTCAGGTGTATTTGCCCGTCGCTGTGGACCGGTTCACGATGCCAGCAGTCGGTTCACTGCATCAACAACCTTTGTCAACATAATTCTGTCTGTGTCCATAACACAGTGTCTGCTTCATATTCATGTATGTGTTCTTTAGGATGGCTTGGGACTTACTGCGAGCAAAAAGTTACGATGAGGACTTTAAGGTTTACTGGAAACTCTTATTTGAAATACAAGGATCCGAAGTACAGCTCTAGGAACCTGATGTACACTGAGGTGTCACTCAATTTTTCTACTTCAGCAGGAGACGGATTGATCTTTTGGATGGGGAAAGCAGAGAGCGAAGACGATGACCATCTAGCGGTTGGGCTGCAGGGCGGTTATATGAAGGTTTCGGTCAATCTTGGTGAGAGAACCTCTCTGCCTCTTGTGTATCAAAACACTTTCTGCTGTAATCACTGGAATTACCTGTCTATTACTCACAACAGGACTCTCATCCAGGTCTATGTGAATGACGAAAGAGTCATTTTTGAAGACATTGACCTCTTTGAACGGTATGTAGCGGTAAATTACGGAGGGGTGATTTATTTCGGGGGTTTTGAATTGAACAGAGATGTGGAATCTGTTACGGATGGTGTATTTACTAAAAGGTTTGATGGGAGTATTAAAGATGTTTTCTTATATCAGGACATCAGAGAGCTGGAGTTTCTACAAAACAGTGAAGGTTTTAATGTATATCAAGGTGAAGAGtagaaaaaaatgactgtgCTTATtgttgatatttgatatttctttcacaaataCATGCTCAATGACACAACCCTAGTAGTCCACGTTTCAAGGTGAAATCTGTTGTTGAACAATGGAATGGGAAAATGATACTGCATCAAAGGTGCTTATGAAAGGTACAAAAAAACCATCATACAAATGTTGATTGAAGGAACAAAATGAAGAGATGATAGCAGGATTTGTGCCTCTTGCTAAATTACAGTTGATATTTGTccagatttatttttgtttatgccACCCAAAACTTTATAACTTACCACTACACTTTAACACAACTTGAGTATTTTAAAAGGGAAAAGAaggattttaaatgaaataatgggGTGACCTTTTTGAATTTATGCATGAACTAATTGTAGAGGATTTTATTCTCCATGTCAAAACAAATGAGGTAAAGAAATAAGGTCAGAATgtcaaactaaatgtttttatttctaagaTACAAGGTTTGCTGTTTTTGCATTAAGATTGTCTAAATACAACCATActccaaaaaaatacaaaatcaggGTTTATTCTTGATACACTTAAATTTCCCATAATGATcaaatgaagagtttatttacaACAGATAACTttgaaaaatcatgttttttatcatGTTATTATTGTTAGCTAGTATGTTATCTTTACCTcatcaaaataacccaaatgcagtttgacagatttattgaaatgcacaataaaaatacttgatttttgcaaattaactcttcAAATGtataatactactactatacTACCCcggaaattattatttcattgctTTTTTCATTGTGAAATAAACAGTACCTTTTTTCTGTGATCTcaggtggggttttttttttttttttattccaatgcatgacaataaaaaatgaGCCTCTTTATGAAACAAAGACTTATTCAGTCGCTTtactaacaataaaaacattttattatgaacTGTACATAAACACATTGTGCTGAATATGCACATTTCCGTTGTGTGACAAGCCAAAATGTACAAAGAAATATTTGTCACCTGAAACATAGAAAATACTTCAGAAGCcaaatttagaaaaattaaaacaaaaataaacgtgAAGCAAAAGAAGCCGTTCTCATCAACCATGAGCTTTGCGTACGAcagtagttttgtttttttgattacAACCA

Function

GO: NA

KEGG:

id description
K19601 EYS; protein eyes shut

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU138967 lncRNA downstream 440690 14187539 ~ 14189904 (-) True G93905
TU138968 lncRNA downstream 440690 14187539 ~ 14189904 (-) False G93905
TU138970 lncRNA downstream 440690 14187539 ~ 14189904 (-) False G93905
TU138971 lncRNA downstream 440690 14187539 ~ 14189904 (-) False G93905
TU138913 lncRNA downstream 725892 13903754 ~ 13904702 (-) False LOC122356386
TU139118 lncRNA upstream 85328 14872432 ~ 14873014 (-) True G94003
TU139135 lncRNA upstream 193892 14980996 ~ 14995700 (-) True G94016
TU139147 lncRNA upstream 238608 15025712 ~ 15036994 (-) False lmbrd1
TU139165 lncRNA upstream 440410 15227514 ~ 15231255 (-) False col9a1b
TU139177 lncRNA upstream 457427 15244531 ~ 15248584 (-) False col9a1b
XM_043256028.1 mRNA downstream 11595 14616799 ~ 14618999 (-) True LOC122356920
XM_043256025.1 mRNA downstream 14669 14614221 ~ 14615925 (-) True LOC122356917
XM_043256026.1 mRNA downstream 17242 14610347 ~ 14613352 (-) False LOC122356918
XM_043256027.1 mRNA downstream 17249 14610347 ~ 14613345 (-) True LOC122356918
XM_043256029.1 mRNA downstream 21954 14607380 ~ 14608640 (-) True ifi27.1
XM_043255651.1 mRNA upstream 237728 15024832 ~ 15099233 (-) True lmbrd1
XM_043254618.1 mRNA upstream 440228 15227332 ~ 15253357 (-) True col9a1b
XM_043254637.1 mRNA upstream 532553 15319657 ~ 15370350 (-) True slc35f3b
XM_043254556.1 mRNA upstream 655961 15443065 ~ 15507712 (-) True zgc:171482
XM_043254645.1 mRNA upstream 759482 15546586 ~ 15561557 (-) True sfrp5
TU138948 other downstream 466246 14160323 ~ 14164348 (-) True srsf5a
TU138949 other downstream 466246 14160323 ~ 14164348 (-) False srsf5a
TU138950 other downstream 466246 14160323 ~ 14164348 (-) False srsf5a
TU138946 other downstream 547836 14079532 ~ 14082758 (-) True LOC122356235
TU138915 other downstream 718757 13910339 ~ 13911837 (-) True G93875
TU139176 other upstream 453646 15240750 ~ 15242797 (-) False col9a1b
TU139178 other upstream 463471 15250575 ~ 15253281 (-) False col9a1b
TU139278 other upstream 777513 15564617 ~ 15583917 (-) True G94128
TU139299 other upstream 854927 15642031 ~ 15642503 (-) True G94147
TU139376 other upstream 965543 15752647 ~ 15755060 (-) True nkx2.3

Expression Profile