RNA id: TU138915



Basic Information


Item Value
RNA id TU138915
length 853
RNA type TUCP
GC content 0.57
exon number 2
gene id G93875
representative True

Chromosome Information


Item Value
chromosome id NC_056711.1
NCBI id CM032080.1
chromosome length 25085836
location 13910339 ~ 13911837 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCGAAAGCACTTTTACCGGCAGCGGGCTGGGGAAGGGTGCGGCTGCACTGCACCACGCGGATCGATCGTTGCTGCCGTTGTAACAGAACACCCGCTTTATTTCcgcaagggggaaaaaaacttttctcGTTGTTCAGGTTAAACGGCCGTAAAACAAAGGCAGCTGGCGAAGCGCGCTATTGTTTAGCGAGCGCGTGTGTACCGGAGTTCTACCGGACGCTGCGCCTCTTTGTTCTGTTCTGCGCGTCCCGTAGACTCTGCCTGGACTTTGCAGGTCTGCGACCTCATGATAATCTTGTAGAAGTTCTGCAGCAATGCCTGGAGTCAACACTCACCCACTGTACGGCTGGGACATGGAGCACTACTTTTACGACCAGATGGACATCGAGGAGGATTTCTTTAAGTCTACAGCTCCGAGCGAGGACATATGGAAGAAATTCGAGCTGCTTCCCACCCCACCCATGTCGCCCTCAAGGACGCTAGATGGAGACTGGTTACTGCCGTTACCGGGGACTGGCTCGTGGGGGCGCCGCCGAAGGTATTAACGTGTGACGAGGAATACGAGGGGCTGCACAAGTTCGATCCACTGGACATTTTTGGGAATCTGGGATCGATCGTTATCAAAGACTGCATGTGGAGCGGTTTTTCCACGAGTCACCGGCTGGAGAAAGTGGCTCACGGCGAGCGAGCTCCGGTGACCGCTCAGATTCAGAGCTCGAGCGCACAGAAAGCTGCTCGTGCCGCATCGGGCACGCCCGTGACCGGGACCCAGGCGGCACAGTGCGTGAACCCCGCCGCAGTCCTGGAGCTTCCTGTCCCGCATAACAAGAAAGTGGCTGCGGGCTCCTCCGGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU138913 lncRNA downstream 5637 13903754 ~ 13904702 (-) False LOC122356386
TU138877 lncRNA downstream 221713 13685947 ~ 13688626 (-) True G93855
TU138489 lncRNA downstream 244079 13665809 ~ 13666260 (-) True G93591
TU138485 lncRNA downstream 246428 13661750 ~ 13663911 (-) True G93588
TU138478 lncRNA downstream 254990 13654379 ~ 13655349 (-) True G93583
TU138967 lncRNA upstream 275702 14187539 ~ 14189904 (-) True G93905
TU138968 lncRNA upstream 275702 14187539 ~ 14189904 (-) False G93905
TU138970 lncRNA upstream 275702 14187539 ~ 14189904 (-) False G93905
TU138971 lncRNA upstream 275702 14187539 ~ 14189904 (-) False G93905
TU139118 lncRNA upstream 960595 14872432 ~ 14873014 (-) True G94003
XM_043255049.1 mRNA downstream 5652 13898258 ~ 13904687 (-) True LOC122356386
XM_043255094.1 mRNA downstream 26167 13858830 ~ 13884172 (-) True LOC122356415
XM_043255902.1 mRNA downstream 57885 13846841 ~ 13852454 (-) True LOC122356831
XM_043255077.1 mRNA downstream 167315 13739649 ~ 13743024 (-) True LOC122356402
XM_043255898.1 mRNA downstream 174517 13727742 ~ 13735822 (-) True LOC122356826
XM_043255522.1 mRNA upstream 24931 13936768 ~ 13938825 (-) True zgc:153911
XM_043255623.1 mRNA upstream 34253 13946090 ~ 13968629 (-) True si:dkey-157l19.2
XM_043255799.1 mRNA upstream 58585 13970422 ~ 13977113 (-) True lgmn
XM_043255798.1 mRNA upstream 58585 13970422 ~ 13977092 (-) False lgmn
XM_043255454.1 mRNA upstream 66255 13978092 ~ 14005778 (-) False pcnx1
TU138887 other downstream 213547 13696072 ~ 13696792 (-) False map3k4
TU138426 other downstream 342414 13564422 ~ 13567925 (-) False srd5a2b
TU138208 other downstream 1313037 12557077 ~ 12597302 (-) True LOC122356414
XR_006252291.1 other downstream 1479561 12429197 ~ 12430778 (-) False tmem234
XR_006252352.1 other downstream 2111307 11771428 ~ 11799032 (-) False utp25
TU138946 other upstream 167695 14079532 ~ 14082758 (-) True LOC122356235
TU138948 other upstream 248486 14160323 ~ 14164348 (-) True srsf5a
TU138949 other upstream 248486 14160323 ~ 14164348 (-) False srsf5a
TU138950 other upstream 248486 14160323 ~ 14164348 (-) False srsf5a
TU139176 other upstream 1328913 15240750 ~ 15242797 (-) False col9a1b

Expression Profile