RNA id: XM_043224073.1


Basic Information

Item Value
RNA id XM_043224073.1
length 957
RNA type mRNA
GC content 0.44
exon number 4
gene id aurkaip1
representative True

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 9145020 ~ 9147322 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

attcaatatttatttgtacCTGACATATCTGCCTCGGAACCTTTGAAGGGTACATCCGTTTTTAGGGGAACCTCCATATTCAATGGACCGGAAGTAGACCGAGTCACATTGAAAATTTTTCCACTCGCAAGtcAATGATGCTCTTGAAGGTGCAACGGCCATAGGACTGTAAACCATGTTTCTTCCAAGGGTGGTTTCACGGCTGAACCTGCTTTCCAAAGTGTCTGgTTCACTGCAGAACCAGAGCCAGGCATTATGCAGTGCCGTGCAACACTGTCGTTCTGCTCATTGCACAGCTCCTAAATATTCAAACAGATGCTTTACTTCAGCTGCGGACAACAAACTTCCACCCAAACTATGGACACCCCTTGAACCAGAGTTAGAAGAAGTTCTTGTGCCCCGTAAACTATCAGTTTCACCCTTGGAGAGCTGGCTTTCTCTGCGCTACTCTTTCCCCCCGTTGCTGGAGGCTTCAGCGCCGCTGGATGAAGGTGAGGCCGTGGAAAAGTCTACGGTGCTTCCTCCATTTGTGGTACCGTTACTGGAGGATGGGGAAAGCCCGACACCGCTGAACTGCAAGAATGTGCTAAAGATCCGACGAAGGAAGATGAACAGGCACAAATATAAGAAGCTGCTAAAACGGACCAAGTTCCTGAGGAAGAGAGTGAAAGATAACAGAAGCAAAAGAAAACAGGTTAAATTTGAGAGGGATCTTGCCCGAATTGTTAAACAAGCTGGACTGAAGAGAGCCCCAGATGGATGGACAGCACCCCAAATCTATGTCAGAATGAGTCAGAATAAAAAAGATTAACATCtgtgctatttaaatatttttgacttctctttttttcataatactATTCACTCTTCTGTGACAGCATCTGGAGCAAAACAGTGACTTGAAATCCATATGTACTACATATGTacttattactgtaataaaaacgCTTCATCTCA

Function

GO: NA

KEGG:

id description
K16830 AURKAIP1; aurora kinase A-interacting protein

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU230837 lncRNA upstream 6830 9135416 ~ 9138190 (+) True G155860
TU230853 lncRNA upstream 13945 9128700 ~ 9131075 (+) True G155868
TU230844 lncRNA upstream 43648 9016267 ~ 9101372 (+) False lzic
TU230845 lncRNA upstream 63538 9029529 ~ 9081482 (+) False lzic
TU230841 lncRNA upstream 111922 8941031 ~ 9033098 (+) False lzic
TU231009 lncRNA downstream 65833 9213155 ~ 9213707 (+) True G155984
TU231010 lncRNA downstream 66818 9214140 ~ 9214454 (+) True G155985
TU231076 lncRNA downstream 436847 9584169 ~ 9584580 (+) True G156034
TU231094 lncRNA downstream 475157 9622479 ~ 9639826 (+) True G156047
TU231142 lncRNA downstream 536424 9683746 ~ 9767105 (+) False G156081
XM_043224221.1 mRNA upstream 115819 9026485 ~ 9029201 (+) False lzic
XM_043224615.1 mRNA upstream 220749 8919723 ~ 8924271 (+) True tardbpa
XM_043224614.1 mRNA upstream 222497 8919719 ~ 8922523 (+) False tardbpa
XM_043224613.1 mRNA upstream 222497 8919720 ~ 8922523 (+) False tardbpa
XM_043224612.1 mRNA upstream 222497 8919721 ~ 8922523 (+) False tardbpa
XM_043225439.1 mRNA downstream 601 9147923 ~ 9155012 (+) True mxra8b
XM_043224733.1 mRNA downstream 9172 9156494 ~ 9186875 (+) True dvl1a
XM_043224734.1 mRNA downstream 9172 9156494 ~ 9186875 (+) False dvl1a
XM_043224462.1 mRNA downstream 42052 9189374 ~ 9193433 (+) True tnfrsf9a
XM_043223999.1 mRNA downstream 64064 9211386 ~ 9212859 (+) True uts2a
TU230934 other upstream 22627 9120884 ~ 9122393 (+) True G155927
TU230931 other upstream 22646 9120884 ~ 9122374 (+) False G155927
TU230843 other upstream 111922 9026508 ~ 9033098 (+) True lzic
TU230751 other upstream 656379 8488086 ~ 8488641 (+) True G155799
TU230667 other upstream 811644 8331741 ~ 8333376 (+) False LOC122328506
TU231143 other downstream 576896 9724218 ~ 9769620 (+) False G156081
TU231144 other downstream 576896 9724218 ~ 9769620 (+) False G156081
TU231145 other downstream 583441 9730763 ~ 9769620 (+) True G156081
XR_006247904.1 other downstream 687774 9835096 ~ 9835170 (+) True LOC122329334
XR_006247902.1 other downstream 688073 9835395 ~ 9835479 (+) True LOC122329332

Expression Profile