RNA id: XM_043224221.1


Basic Information

Item Value
RNA id XM_043224221.1
length 1416
RNA type mRNA
GC content 0.37
exon number 7
gene id lzic
representative False

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 8941031 ~ 9101372 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GCTCTGTTTACGCAGAAAAGACGTTCGATTTCTATTGGAGATAAATTGTGCTAGCAAACCACACCTTAGCAACTGGACTTAGCAACTTAAAATCTTATTGTGTCTTTATCAGTTGGacgtttttggagaaaaaaGCACGGataAAGAATGGCTTCTAGAGGGACATCAGAAACAAGCAAACTGAGACAAAATATGGAAGAACAGCTGGACCGGCTAATGCAACAGCTTCAGGATTTAGAGGAGTGCAGagaAGAACTTGAAGAGGAAGAATATGAAGAAACCAAAAAAGAGACACTAGAACAGTTGAGCGAGTTCAACGAGTCATTAAAGAAGTTGATGTCTGGGAATATGACACTAGTTGATGAACTGGGGGGAATGCAGCTGGCGATCCAAGCTGCCATCAGTCAGGCATTCAAGACCCCAGAAGTCATTCGGCTGTTTGCTAAAAAGCAGCCAGGGCAACTGAGGACGAGACTGGCCGAGATGGACCGTGACGTGATGGTTGGAAAGCTCCCTCGAGACGTGTACACTCAGCAGAAAGTGGAGATCCTCACAGCTCTTAGAAAACTTGGCGAGAAGCTGACCACAGAGGATGAAGCGTTTCTTGCTGCAAATGCTAGTGCCACTCTGAGCCACTTTGAGAAGGTGACCGCGAGCCTGGGATCTGAAGATAAGATAATGGCATTAGCCAGTTCTGGAGTTGAGAAGACCTCGACATAAAGGTTCATTAAGATTGAGTGTGGCCTAAATGCTGTCTGtgcattttacagtatttacagtaatttttttttttaacaatggttcctattttgtacatttaggAACAGAACTGTGAGATGAAATCATGAGGTCACTCAACCTAAAGATTCATCTGACAGTTTTCTTATTGTATACATCCTATACATTTTATGTTcgatttgtacattttgatttgGGTACAgtggaggaaaaaaagtgtttacattttctgtgaaatgtctcaaacatttataaaagctaattttaGAATAGTTCTTATTTTACGAATACAGAGGGGTAAAattgtcaaaaaagaaaaagtcctgattcttttcaactttctggttgtaaagtaatttattaacCTGTTGCCAATAAGCCTTTTTGGTACTAGTATTTGATAGTAAAATAGATtactatgcattttaattttgtttgttagaacttttttttaaaccagtgtgatatttgtaaatactttgtatttgaatatatttggcGATCAACATCTTAAAAGTTGTCAgtgttttgtcttttctctctttacagcttttcttttgtaatgcatttggTTAAAAAGATCAAGAACAGGTTTAATCTCTGCTAATCCTATTACAGACTGGATTGTGATCTTTGGAAAAGATTtctaaactttattaaaaatgcctAATTTCACAC

Function

GO:

id name namespace
GO:0030154 cell differentiation biological_process
GO:0007417 central nervous system development biological_process
GO:0008013 beta-catenin binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU230880 lncRNA upstream 19747 9005042 ~ 9006738 (+) True G155894
TU230818 lncRNA upstream 86779 8915357 ~ 8939706 (+) False G155850
TU230817 lncRNA upstream 88110 8821438 ~ 8938375 (+) True G155850
TU230819 lncRNA upstream 88518 8901014 ~ 8937967 (+) False G155850
TU230820 lncRNA upstream 94636 8929744 ~ 8931849 (+) True G155851
TU230845 lncRNA downstream 328 9029529 ~ 9081482 (+) False lzic
TU230853 lncRNA downstream 99499 9128700 ~ 9131075 (+) True G155868
TU230837 lncRNA downstream 106215 9135416 ~ 9138190 (+) True G155860
TU231009 lncRNA downstream 183954 9213155 ~ 9213707 (+) True G155984
TU231010 lncRNA downstream 184939 9214140 ~ 9214454 (+) True G155985
XM_043224615.1 mRNA upstream 102214 8919723 ~ 8924271 (+) True tardbpa
XM_043224614.1 mRNA upstream 103962 8919719 ~ 8922523 (+) False tardbpa
XM_043224613.1 mRNA upstream 103962 8919720 ~ 8922523 (+) False tardbpa
XM_043224612.1 mRNA upstream 103962 8919721 ~ 8922523 (+) False tardbpa
XM_043224775.1 mRNA upstream 336652 8629204 ~ 8689833 (+) True pex14
XM_043224073.1 mRNA downstream 115819 9145020 ~ 9147322 (+) True aurkaip1
XM_043225439.1 mRNA downstream 118722 9147923 ~ 9155012 (+) True mxra8b
XM_043224733.1 mRNA downstream 127293 9156494 ~ 9186875 (+) True dvl1a
XM_043224734.1 mRNA downstream 127293 9156494 ~ 9186875 (+) False dvl1a
XM_043224462.1 mRNA downstream 160173 9189374 ~ 9193433 (+) True tnfrsf9a
TU230751 other upstream 537844 8488086 ~ 8488641 (+) True G155799
TU230667 other upstream 693109 8331741 ~ 8333376 (+) False LOC122328506
TU230347 other upstream 1722127 7299279 ~ 7304358 (+) False tcea2
TU230359 other upstream 1787566 7225994 ~ 7238919 (+) True G155561
TU230095 other upstream 2431750 6592606 ~ 6594735 (+) False si:ch211-220i18.4
TU230931 other downstream 91683 9120884 ~ 9122374 (+) False G155927
TU230934 other downstream 91683 9120884 ~ 9122393 (+) True G155927
TU231143 other downstream 695017 9724218 ~ 9769620 (+) False G156081
TU231144 other downstream 695017 9724218 ~ 9769620 (+) False G156081
TU231145 other downstream 701562 9730763 ~ 9769620 (+) True G156081

Expression Profile