RNA id: TU24084



Basic Information


Item Value
RNA id TU24084
length 706
RNA type TUCP
GC content 0.37
exon number 6
gene id zc3h7ba
representative False

Chromosome Information


Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 1788245 ~ 2000474 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TTGGATTAGTCGAACGTAATTATATCGCGTATCGAATTTGCATCCCAGTTATTAGCTCTATAAATAAGCAGAATACGCTTTCTACTCCGCACACGTTCCCAATAACGCGAAAAAACGATTTCTGGACGTACTCGAATGGACGTCGAGCGCCCCCTCTATTATTAGCTGGAAACATCAGGCGAGGGAGCGGCGCGACGTCCACACGCGTTTGGCAGCGCGCTGAGCTCGAGCAGCGGACGAGCCGTCGGTCGCTCGTCTAACGTTTTACACGCAAGCCGCCAACGAAACGCGCGCGCGACTCGGAGGAAAGCGCGGGAGTTTCTGCAGATACAGgGTTGTGATGATCAAACATGAGCGCTGAGCGTCAGAAGCGCAGGGAGGAGATCCAGACAGGACTGAGCTTCATCAaGTGTTCTCTGCCTTATCCGGACCCTGAAGGCTTCGAGGTCGGGCTCGAGCGAATTCACGGAGGAGAGCTGAATAAAAGCGGGGCAGCTGCAGGATCTGAGGGCGACTCGGTCATGCCGTCACTTTTAGATGAGaCTTCTTCTGTGGGACTGGAGGAAGTGACAGACTCTGCAGGTGACTCTGGTTGGCCGCCTCCGTCCTCGCGAGCGACCCCACGGGCCCTGGGTCTGGAGGACACCGAGCTGATGGGAGACGAGCTGGACAGTCTGCTGGACTGCATGTCTAAAGAGGAAGACGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU24086 lncRNA downstream 9218 1776314 ~ 1779027 (-) True LOC122330697
XR_006248055.1 lncRNA downstream 9943 1776891 ~ 1778302 (-) False LOC122330697
TU24056 lncRNA downstream 133197 1654314 ~ 1655048 (-) True G16184
TU24034 lncRNA downstream 140629 1617248 ~ 1647616 (-) True G16170
XR_006248054.1 lncRNA downstream 199816 1586841 ~ 1588429 (-) True LOC122330691
TU24108 lncRNA upstream 945 2001274 ~ 2001571 (-) True G16217
TU24376 lncRNA upstream 124987 2125316 ~ 2125718 (-) True G16385
XR_006250527.1 lncRNA upstream 135740 2136069 ~ 2140359 (-) True LOC122342126
TU24391 lncRNA upstream 238969 2239298 ~ 2240445 (-) True G16393
XR_006250484.1 lncRNA upstream 262342 2262671 ~ 2265631 (-) True LOC122341671
XM_043227313.1 mRNA downstream 80601 1702567 ~ 1707644 (-) True tefb
XM_043227464.1 mRNA downstream 94193 1691319 ~ 1694052 (-) True polr3h
XM_043227468.1 mRNA downstream 94607 1691319 ~ 1693638 (-) False polr3h
XM_043227727.1 mRNA downstream 97066 1687167 ~ 1691179 (-) False csdc2b
XM_043226595.1 mRNA upstream 10213 2010542 ~ 2014639 (-) False LOC122329915
XM_043226622.1 mRNA upstream 22032 2022361 ~ 2028091 (-) False LOC122329915
XM_043226649.1 mRNA upstream 29036 2029365 ~ 2036345 (-) True LOC122329936
XM_043226605.1 mRNA upstream 36516 2036845 ~ 2042422 (-) False LOC122329915
XM_043226613.1 mRNA upstream 36516 2036845 ~ 2042422 (-) True LOC122329915
TU24042 other downstream 135879 1620964 ~ 1652366 (-) True G16172
XR_006248017.1 other downstream 604657 1164316 ~ 1183588 (-) False LOC122330455
TU23864 other downstream 635485 1147589 ~ 1152760 (-) True G16054
TU23858 other downstream 642728 1143803 ~ 1145517 (-) False LOC122329780
TU23851 other downstream 673543 1109491 ~ 1114702 (-) True G16048
XR_006250468.1 other upstream 184116 2184445 ~ 2202569 (-) False pkn1b
TU24410 other upstream 302998 2303327 ~ 2362399 (-) True G16402
TU24428 other upstream 333227 2333556 ~ 2423546 (-) False LOC122341602
TU24448 other upstream 443739 2444068 ~ 2450203 (-) True G16421
XR_006250471.1 other upstream 478799 2479128 ~ 2484224 (-) True LOC122341591

Expression Profile