RNA id: XM_043234138.1


Basic Information

Item Value
RNA id XM_043234138.1
length 6113
RNA type mRNA
GC content 0.47
exon number 7
gene id glis2b
representative False

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 4278495 ~ 4314259 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GGGCTGATCCCTCCGCCCGCTGCGCccgaggagaggagaggagacaCGGACAGGCTCGAGTCCGGGGTGCTGGAGACCCACCTCACCGCACGCCGTCTCCAAGGACAACGTCAAGGCCCCAGGACTGGAAACGACCCGAGGAGAGCGCGGACCCGACACGGAGACACCATCCGGACGCGAAGCTGAAAAAGGGGACGTCTCCTCTCCATCGCCTTTTGCGCACGACCACCCGTCAGAAAACCCTCCGGACCGGCGCCGCCAGCGAGCGATGCACCCTGACGCCAAGACAGCGATCGCCCCGATCGGTTCCCGTTTGTTTTTTTAGCGTACCGTTCTTCAGCAGTCGATAATAACAGCGCGGTCACCGTgttgacacacacacgcaggcgCGCGCGCACACGTGCATTCAACGGGTTTCTTCTTCATGAGGATATCCTCATGGCCTGAAACTGACATAAACTACTCAACCCGTCGCGTTCGCCCCGGACCGACGCCGTTTTTTTAATCCTCGCAAGTCTGCTTTTCCCCGAGCACCGTCACGCGTGTCCAGACAACGGTCTGATGCTCTCAGACGGCAGTAGATTATTCAGCCGCTGCTGACAGTGTCTCACAGGTCCTTCTGCGTAATCTGCCGGGCCTTGCTTAAAAAAACTGCTAGTTTCGTGATCCGAGGGAATTGGAGCAAACATCCCCTCTGGAAAAGTTTAAGGTGGAGACCGGTGCTGGGCCGTGACACATCCAGGAGGTTTCACACAAGaCGCATGCCGTCATGCTGTCCTTAGACGAGCCGCTGGACCTGAAGGTGCCCAGGGGGCGGGTCAGTGGGCGGGACAGAGGCGCCAGGTCTCCGCCCACTCTCACTCCCTCCCCTATTCACGGCAAGGGGGCGGGGCAGCTGCGGATGACCGACGACGGGACGGCAGTCATCGTCCCAGCGTCTCCTGCCTCTCCACACACGGGTGTCCTGCAGGATAAACCGGAGACCCCCACACCACCCGCCGTGGACCTCAGCATGTCCCCGTCCTCCAGAAACGCCGCCTGCTCTCCGGATCTCTCCAATGGACACGGCTCAGCTCCCGTTTTCCCCGGGGACTCGGCTCATATCCGTTACGTGGAGGGAGGGGCGACGTCTCAAGCGTTCCAGTTCTTCGTGCCCATTGGAGGAGGTGGAGGGCTTCACCTGCCTTCCTCGATGTTCATTCGGCAGCCCAAGGACACGCGAGCTTCTCCAGACCTCTCCGCAGATGAACAGCTGGCCTGTCGCTGGAGGAAGTGCCACCTACTTTTTGACTCCTTGCAAGACCTGGTGGATCACGTCAATGACTTCCACGTGAAGCCTGAGAAGGATTCTGGGTACTGTTGCCACTGGGAGGGTTGTGCGCGTAAAGGACGGGGATTCAATGCCAGGTACAAGATGCTGATACACATCCGTACTCACACCAATGAGAAACCCCACCGCTGTCCCACCTGCAACAAGAGCTTTTCCCGCCTGGAGAACCTCAAGATTCACAACCGCTCGCACACAGGAGAGAAGCCCTACATCTGTCCCTACGAGGGCTGCAACAAGCGATACTCCAATTCCAGTGACCGGTTcaaacacacgcgcacgcactaTGTGGACAAGCCCTACTACTGCAAGATGGTGGGCTGCTTGAAACGCTACACGGACCCCAGCTCCCTGAGGAAGCATATAAAGGCTCACGGGCACTTTGTAGCCCAGGAGCAGGGAGGTCCTGGTGGGGTGGGCTCTCTGATGAAGCCGGGGCATATTGTAGGGGCAGGGAAAGAATCTGAGCTGACTTACGTCAGTGGGGCCCACATCATCATTCCTGGTGCTGCCGCCGCTCTCCTTGGCGGTCACGGTCTGCAGGGTCTCGGAGGCTCCCTCCCCTTGTCCCCCCTCAGTCCCCGCCCCTTGGACTTGAGCACACTGGGCTGCCCAAGCTCCCCTCCAGCTGGGCTTGGGGGGACGTCCATCCTGTCCTTCAGTGGTTCCCCACTCGGCCTAGCCAAGTCACCCTTGCTATCTCATACCTTCTCATCTTCCACGTTGGGGTTGCCCATGGTGCCGATTTTGGGCTCGGAGCGCAGGGACCATGGCAAGGGCAAGGCCAGAGGCGAGGAGAGTGAGGACGAGATCCACAGCGGAGTGCTCAACTTGTCTACGGGGGCGTCCCACGACCCGCTGTCTTGGGTTGTCATCCCATCTGGCCAGGTGGTGCTGAAGCCAGCTGTGGTCAACTGAGCACCACATTCCAGAGGAACGGGCAGGGGAAGGGTGGGGGTGGAACAGGGGTCAGAGATCAGAGGCAAGCCTATGGGGGTTTTCTCAAAGCAAATGCGGTTCTGCTTGGAGATGACACCATCTTCAATTTTAGCGCTACTTTGGTTCTAATTTGTACTTTATGGTCAGACACAGCTACctgttttttgtggaaattggAATGGAATCTTAAAGTGAAATTTTCTAACAATCTAAAGGCAGACACTCACCTCCATtacattctctttctttcagtcTTATCTTAATACCAGGGTTATCCAATCTTGCTCCTGGAGTGGTTAGCTCCAACCTGCTCTAACACACCTGCTTGAAAGACTGGAGTAATCCTGAAGAGCTGGACTCACTGTGCTTAATTACGGTTGGGGCTAAAGCAGTGGTGGGCAAATCTGGCCCTCAAAGCACTGCTCAGTTACAACCCTCACTAAACACAAGCTTAGCCTTCATGATTACTAGATAAATTACAGCCAGGTGAGTTTGTTGGAGGTAAGCTTTGCAGGACAATGGACCTTAAGGGCCAAGTTTACTCTCCCCTggtctaaactctgcaggaaggtgGCCCTCCAGAAGCAGGATTGAACCCTAAGTCttatacactttattttctgttttttgagAGCACTGATCTTAACGGCAGACTTCAGAATCTGTGCCCTTGCTTCAAGAGACAATTGTATTTATGTGTAAGAGAAACTTTTGGACGACAGTGTACGCAACACACTAAAGACACAAATGTATGCCATTATTCTTCAGGAACTGACCTTCAAGTCATTCCgtgcataatataaaaaagaccTCTGAGTGTAGCGAGCTAGAGATCTTTGAGGCTAAATTGCATGGGCTTGGTCAGGTTTGCGAAGGGGTGCTGAGGTCGTAGGTCAGACGAGAGCAGCTTGTTTACTTGCTGTCAATCAACATTTGTTGTACCCTTTAGACCAGTGGTGTCTGATTCTGGCCCTGCTTTgccactttcctgcagagttcagctcctCAAGACAAGTTTCTATTGATCCCGAAGACCTTGAGTAGctggtgtgtttaattagggctTGAGCTAAACTTTACCGGACAGTGGCCCATTAGAAACAGGAATGGACACCCCTGCTACAGACTGTCTCAAGTCACACCTCGGTCAGCAGGTACCCTCTGCATTCCTTGCAAGTGAACTTCCTTAGCTCAATGCTACTGCAAGCTATATGAAAAACCTTGCGTTTGCTGCTAGCTGTGTCACTGCAATGTAAGCATAcatctttgaataaaaatagacaaaGTATGAATGACAATCTGTCCTCAGAGGAGGAGGAAATAGAAACCTTGACTAGCTCTATTTTGTTGAATAAGAAAATTTACAGACACAAGGCTCAGACAGACTGAGTTTTAAGTCATACAAGGGCACAAACTCATCAAGCAATCATGCTAACGCCCCATGGACATGGCACTGTTATAAATAGTGCCATCTTATGGTCATCACTTGTACTGCACAGTACTGAACCAAGGGCCTGATTTAACAGTATTGTCCTGCTTTGCAGTATATTAGCACGGCAGGGTAAAACAAAGGACCTCTGGCTGATGCATAAAAGTggaatgttaaaaacaacagttaTCCACAACCCAGTGGACATGCTGACATTTGCAGTACACAAGCTTTAAGTGTACAGCAACGATTACGTGCATAGTTTGGTTAAAATAACTTTGCTTTCACAGTTTGCCCCATGTTAAATCACTGTGCTAAAAATCTAATCGAAAACTCAGAGATTAAAGTAGTGACTTAATAACAAAGTGCAGAAAGCACTATGCAGGTGGCCAAAAGATAGCATTTTGATTGAAGACTCTTTCACATGACCCACATCAACATTCTCCAATGCACCAAACTCTAGAGCAGGGCGTCAAGTTTCAGAATTACCCCTGATGCCACCTTACACAAATGGAGTTGTAGGCAATGCTCCAAGTACTAGAAATTTCACATTTCACCTCATTTGGCTCTGATTTGCAGTTGCAATGATGTGCAATTATGTGGTACGTCATACAAACTGAAAATCAAGAATCAAAAGACTAGATTTTAGGCACATCAAGTAGTACAACACAACCTTTAAGGCAGATATTCACGTTGTGCATTTTATGATACCATCTACAATTCTTGTGTTGAAAGGTGAATTGAAGTTCTAAAGTGGGTCATGTTAGAGATGCTAAAAATTTCACAATCAAGATCTCAACCAGATTAAAATAACACTCTTGATTAAGTCTTCTCTCCTGAACTCAGTCGCGTAACAGTCTCTGTCTTCTCAGGAGAAGTACTTCTATAACAGAgatcaaatatttaaagcatctttCAGTAATGTCCATTACTCATAGAttggaagaaaaacaatataacagAACAAACGAATGTAAAAACATTCTGACTAAAATAATCGCACTTCCTTAAAGCATGTTCCCTGCCCTCCCCTCCGAACCATTTTTACACTCAGAGTCTTATtccataattatttttgttttattgtttgtggAAACTATACGattaatgctgttttgtttaactgactttttggttttgtttttggacGTGACATTTCCTGATGTTGAAGTTGCTTCGTTTCTGCTATCGCTATTTCGTGCTCAGCTTTCTCCAGCTGATGAATCGCGAGGAAATAGGACTGATAAGTTTGCGGGAAGGGTTTTCTAAGAATCCCTCACATTTAGACCAAAATCATCCCGCCAACGTTTGAGGTTTACATGCGGTAGGATGTCTTGTATAACGGACATTCGTCCATTCGACATGTCCGCATCTTGACAGCGTGCCAAGTTTCAAAAGTAGGCCACTGACCCTTACACGGCCCCAGATTATATTTATTCGGTTAAAGCCAAGAAAAGGTGCTTCTAGAAAGCCTTTTAGTAGAGATAATATGCAAATACAAGcagtaataaaacacaatccTCTAAAGTTTGGAGAGCTTTGACATCGGCATGTATTTACACGGTAATGCCGTTTATTAACCCTAGCGTCCTTTAAACAAGTTTGTCCACCTTCTATTCCCTTTACTCATGTTGTTGGCTGGAGGAAGCTGATACTGACACAGACCTATCAAGGTCTACATCAATGTTCAATATCAGATAAGCTGTTTGAACCTTTAACCCTTTGAGCACTCTGAAAACGGCCTCGCTGTTTTACACGGGAGACTCCAAAGGCCTTAACAAAACGATGGTGCGTCCCCAATGACTCTGAATTTACTGCAACTGCATGCGAGAGACTTAAGCAATAAACTGAATGGCAGGGAAGATGTCATAGCTAGATATTTAAATTGAGATATTCACTCCAGTAAAGGTCCaacgatgcaaaaaaaaactataaacggTACATAAAAATAAGCACCATTTTAGAATCTAAAAAAAAGCTCACATTAAAAGCAAAGACGTTTCTACAATTAACTAATAATAGGACAGATTTTTGAAGAGCCACAGAGATGCACAAAGGGTTAACAAAAAGACTACGGCCTGGAAAGGCCAGCatccattatttttttccttttttgcacatttttgagatattttaatgtcagtattttaattttttccaagTGCCTTTTATTATAGTTGAAATGTAGATGTAATACactatatgaaaatatatatatatatatatataaataaatatatattttttcccagCATCATGTTCTAAAGCTGAACATGCAGAATTTTAGAGCTGTAAAAGTCTCCAGTTGGTACAACATAGGTGTGTGCTCCTGTTTTAGAGGATTTTTATTACGATATTGATAAGGAtgtcaatgaaaataaaagaaacaaacgtTTAATAAATTTCCATTTGATATAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU25199 lncRNA downstream 640 4234375 ~ 4277855 (-) True G16926
TU25205 lncRNA downstream 11003 4265211 ~ 4267492 (-) True G16930
TU25204 lncRNA downstream 11003 4266703 ~ 4267492 (-) False G16930
TU25171 lncRNA downstream 140292 4137118 ~ 4138203 (-) True G16901
XR_006250532.1 lncRNA downstream 491630 3783737 ~ 3786865 (-) True LOC122342142
TU25209 lncRNA upstream 922 4315181 ~ 4315571 (-) True G16933
TU25232 lncRNA upstream 55466 4369725 ~ 4371084 (-) True G16949
TU25233 lncRNA upstream 80942 4395201 ~ 4397033 (-) True G16950
TU25262 lncRNA upstream 128552 4442811 ~ 4443269 (-) True G16974
TU25541 lncRNA upstream 129439 4443698 ~ 4443924 (-) True G17129
XM_043234136.1 mRNA downstream 36799 4215851 ~ 4241696 (-) True vasnb
XM_043234155.1 mRNA downstream 124537 4146684 ~ 4153958 (-) True dnaja3a
XM_043234379.1 mRNA downstream 156968 4114379 ~ 4121527 (-) True LOC122341056
XM_043234413.1 mRNA downstream 170747 4103239 ~ 4107748 (-) True LOC122341077
XM_043234135.1 mRNA downstream 183200 4079508 ~ 4095295 (-) True ccnf
XM_043234290.1 mRNA upstream 235428 4549687 ~ 4568305 (-) True LOC122341001
XM_043234213.1 mRNA upstream 259088 4573347 ~ 4588316 (-) True LOC122340945
XM_043234221.1 mRNA upstream 259089 4573348 ~ 4588316 (-) False LOC122340945
XM_043234226.1 mRNA upstream 259091 4573350 ~ 4588042 (-) False LOC122340945
XM_043234206.1 mRNA upstream 259311 4573570 ~ 4588316 (-) False LOC122340945
TU25102 other downstream 291064 3986240 ~ 3987431 (-) False LOC122340684
TU25103 other downstream 292828 3984667 ~ 3985667 (-) False LOC122340684
XR_006250503.1 other downstream 414644 3851352 ~ 3863851 (-) False LOC122341931
XR_006250494.1 other downstream 795046 3473444 ~ 3483449 (-) False LOC122341810
TU24952 other downstream 959431 3315438 ~ 3319064 (-) False LOC122333478
TU25236 other upstream 88838 4403097 ~ 4407697 (-) True G16953
TU25544 other upstream 133121 4447380 ~ 4448881 (-) True G17131
TU25560 other upstream 136056 4450315 ~ 4453135 (-) True G17133
XR_006250404.1 other upstream 289491 4603750 ~ 4605565 (-) False LOC122341034
TU25607 other upstream 364325 4678584 ~ 4679783 (-) True G17167

Expression Profile