RNA id: XM_043235667.1


Basic Information

Item Value
RNA id XM_043235667.1
length 3110
RNA type mRNA
GC content 0.50
exon number 17
gene id mylk5
representative False

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 11616195 ~ 11629282 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AATCACTAGTCAATATagcacacactcgctctctcttATCGccacttctctttctctttcaccaCAGTCATAGTTTATGTTGAAAAGCAAACCGTGTTACAGATATAGTTACGGGTGGGGTTTGCGACAAGCCCAGCAAGAGGACAGTGTTCTGCAGACCGACTGAATGAGGAGTCAGTCGCGGGGAGGAGCCAGAAACTAAAGAGATGCAGAGAACTGCTCTGGACAGGAGACATGTGTGCGTAGCAAAGACTCAAGAGACACAGGAAAGTACAAGCCACCTGATAAGAAGGCTGGGAAATGACTTGGATTTTATGAAACTGGTATGAACAGACAGGAGAAATGAGCATTGCTGATGGGAAGACGCGATACGTGTCCACTTTCAGGATACAGCTGTCCAGCTCCCAGTCAAAGGGGGCCAAAACGGGACAAGCGTCCCAACCGGCACACATCCCCACAATCACCACAGCCGCCAAGAAGCCTGGAGAGACTTCCAACGCAGTGAGTAGTAAACACAGTCACACTAGTGGTCTGGATCCACCGGTTTTTACTGAGCCCCTTGATGACTATATAGTGGATGAAGGAAATGACATCACGCTGAAAGGGACTATCACAGGGAGCCAGCCAATAAGCATTTCCTGGCTTCATAATGGTGAGCCTGTGCTGTTTGGAAAATCCTCATTAGTAGGAGGAGAAGTTACTTTGATAGTTAGGGAATGTCTCCCAGAGGATGCTGGGGCTTATACATGTGTGGCTGAAAACACAGCAGGAAAAACATCCAGCAGTGCAGCAGTGTGCGTGAGAGACTATGAAACAATCATTGGGATCCGTAACAATATTGCCAACACATCTCAGTCTCATCCTAATCCCTCTCATCCTCACATCCCTGCCATGCTAAGCGGGGTCTTAAACTCATCTCAGAGCGTCCCAGAAGacatcagtgtttttaaaggcCCACAGTCACCGCAGTCACCTCAGACAGGAAGTCCTACAACGCTCAAGAGAGAGGTGCTTGTCAAGAGAAGAAGCAGCTCCGGTACAGcACCTCCTCTGCAGTTTGTAGATCCTTTAGATCGTCTGGAAGTGCATGTTGGAGAAACGGCTCgttttaagtgtgtgtttaaaggcAGCTCTCGTGTAGCTTCTTGCTGGGTCTATAACAAAAAAGAGGTGGTGGAAAGCTCCAGGCTTCATATTGAGTCCTGCAACGAAAGCAGTTCTCTGGTGATTTCTGACGCCCGTCCTGAGGACTCTGGACGTTACACATTATTTGTACGAGATCGCAAAAGTTCAGCCCAACACACAGTGACCCTGAATGTCATTGACCTGCCTCAGGCGCCAGCCTCCTGTCCCGTGGCGTATGTCCTCTCCCCTCACTCTCTGGTTTTGTCCTGGTCTGGGCCATCCTACGATGGCGGCAGTGCTGTGACGGGATACGTGGTGGAGGTTTGTGAAAGCCCAGGTGTGACTGACCATTGGAGAGAGCTCACAGCCCAGTGCAAGAGCACCTCGTTTAGGGTGACCTCAGGACTCCAGCCTCAAGAAGAATACTGCTTCCGGATCAGGGCCTGTAACGCTGTGGGGGTCAGCGAACCAAGCCAAGAGTCCCAGCCAATCAAGATGGACAATCCAGAGCCCTGTGACGAGAAACCAGTGGAGTATGTGACTGTGACCATCAACACAAAGGATAAACTTACTGACCATTATAACGTCCAGGAAAAGCTCGGAGTAGGGAAGTTTGGGCAGGTGTTTCGGATGACCCATAAGGAGACGGGCCGTGTTCGCGCGGGGAAGTTCTACAAAGGTCGTCGGACAAAGGAGAGAGAGGCTGCGAGGAAAGAAATAGAGCTAATGAATTTCCTGCACCATCCAAAACTCGTGCAGTGTCTTGCCGCATACGATAACAAGGATGAGATGGTCATGGTGATGGAATAtgTTGCTGGTGGAGAGCTGTTTGAGCGCATTGTGGATGATAGTTTTGAGCACACCGAAGTGTCCAGTGTGGGCTACATGCGTCAGATTCTGGAGGGGATTCAGTACATGCACCAGCAACACATTGTCCACCTGGACCTCAAACCTGAGAACATCGTCTGTGTGGACAGAACCGGGATTCAGATCAAAATCATTGACTTTGGACTCGCTAGCAAACTGGATCCCAACACCCCCGTGAAGGTGATGCACGGCACTCCAGAATTCGTCGCTCCAGAGGTCATCAACTATGAGCCCATATGCCTGGCCACCGACATGTGGAGCATCGGGGTCATCTGCTACATCCTGTTGAGCGGCGAGTCTCCGTTCCAGGGTGAAAGCGACACGGAGACTCTGGCTCTGGTGACAGCGGCGCAGTGGGAGTTTGACGAGGAGAGCTTTGAAGATATCAGCAAGCTGGCGAAGGATTTCATTAGCTCTCTGCTCAGCAAAGATGTCAGGCGCAGGATGTCATGTGAAGAAGCCTTGGCTCATTCCTGGTTGGTGCACACTTGCGTAGACAACGGCGGCGGCGGCAGCAGCACCAAAAACCTTTCCAAAGACAAGATGAAGAAATTCCTCACTAGGCAGAAGTGGAAGAAAACAGGCAAAGCGCTGCTGGCTCTGAAGAGGATGGCTATATTGTCTAAACCAGAGGCTTCTGCGAGCTTGAGCCCTGTGGATGAGACGGAGAAGACGCTGCAGACTCTGGAGCTGAAGCTTCAGAGTAAGCCCGAGTTCAGTAAGACTCCGTGTGACCTGACTGTGCCGGAGGGCTCCAGCGCCCAGCTCTCCTGTCTCATCACAGGCTACCCTGACCCCGAGGTGGTGTGGCTGAAGGACGGAGATCTGCTGGAGCTGCAGGAGGAGTGTGTTCAGGTGGACTATGAGGAGGACGGCAGCTGTACTCTCACCTTAGAGAACGTCTCTCCGCTCCACAGCGGCCTGTATTCCTGCAAAGCCACTAATGTACTCGGGGAGGCACTGTGCTCTGCTTCTCTGACCGTCGAGGAGATAGACTAACACACGAatacataatgaaataaaaaaatacacaccagACAGAATAAAATACACTGTTGAATCAGTGCCAATATAATTATAAACTGAATGTtacaattgtaataaaaaaaatctaattg

Function

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU28491 lncRNA upstream 174857 11440506 ~ 11441338 (+) True G19126
TU28487 lncRNA upstream 178998 11436944 ~ 11437197 (+) True G19123
TU28233 lncRNA upstream 235405 11380273 ~ 11380790 (+) True G18946
TU28274 lncRNA upstream 240794 11371502 ~ 11375401 (+) True G18982
TU28230 lncRNA upstream 245250 11326598 ~ 11370945 (+) False G18945
TU28582 lncRNA downstream 83327 11712609 ~ 11719579 (+) False G19184
TU28579 lncRNA downstream 86449 11715731 ~ 11718772 (+) True G19184
XR_006249757.1 lncRNA downstream 205490 11834772 ~ 11835253 (+) True LOC122338225
TU28625 lncRNA downstream 262621 11891903 ~ 11893656 (+) False syt5a
TU28622 lncRNA downstream 338366 11967648 ~ 11974006 (+) True G19208
XM_043235982.1 mRNA upstream 10018 11603674 ~ 11606177 (+) True fzd2
XM_043235659.1 mRNA upstream 22027 11591600 ~ 11594168 (+) True ccdc43
XM_043235460.1 mRNA upstream 101036 11497653 ~ 11515159 (+) True LOC122341817
XM_043235874.1 mRNA upstream 202926 11408037 ~ 11413269 (+) True clec19a
XM_043228438.1 mRNA upstream 249080 11362983 ~ 11367115 (+) True si:dkey-66i24.8
XM_043234588.1 mRNA downstream 11420 11640702 ~ 11645443 (+) True dcaf7
XM_043234596.1 mRNA downstream 11420 11640702 ~ 11645443 (+) False dcaf7
XM_043235535.1 mRNA downstream 110997 11740279 ~ 11749928 (+) True strada
XM_043235536.1 mRNA downstream 110997 11740279 ~ 11749928 (+) False strada
XM_043235537.1 mRNA downstream 111529 11740811 ~ 11749928 (+) False strada
TU28236 other upstream 246443 11368893 ~ 11369752 (+) True G18949
TU28257 other upstream 280370 11333759 ~ 11335825 (+) True LOC122331261
XR_006250543.1 other upstream 453752 11162354 ~ 11162443 (+) True LOC122342197
TU28036 other upstream 834342 10752759 ~ 10781853 (+) False kcna7
XR_006249731.1 other downstream 143919 11773201 ~ 11833924 (+) True kcnc3a
XR_006249728.1 other downstream 143919 11773201 ~ 11833924 (+) False kcnc3a
XR_006249729.1 other downstream 143919 11773201 ~ 11833924 (+) False kcnc3a
TU28690 other downstream 463321 12092603 ~ 12100852 (+) True LOC122342134
XR_006249244.1 other downstream 674082 12303364 ~ 12312990 (+) False nbr1b

Expression Profile