RNA id: TU239863


Basic Information

Item Value
RNA id TU239863
length 1586
RNA type TUCP
GC content 0.46
exon number 2
gene id G161992
representative True

Chromosome Information

Item Value
chromosome id NC_056722.1
NCBI id CM032091.1
chromosome length 21790128
location 10280797 ~ 10286608 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GGAGCCCCAGGGGGAGCGGCCCATGAGGGTGTGACTGGAGGGGGCAGAACCGGCAGATCAGAGAAAATACATGTTGAAGACAATTCATTCTTTAATGTCGCAGACGTGCAAGCCTTGTTCCAAGTTACTTGATGTCTATACGGCCGAGTACATTGTGCATAAGTGTCTGTATGCGTCATTTGGGATGTAGCTATTGTCTTTAGAATAGAATGAGACTGTCCTAAATGGTAATACACAGAAATGTAGCATGCTGGTACGCAGAAAGATGATCATTTCTGCTGGAAACTGATCCTTGCAACACTGGCTAATGTTGCCCACAACCCGTTGCTCGTTGGATGAAGATTTGGTTCAAACTAAGCGGTAAAACTAAAACATGGAGTAATCTTTTATAAAGAAATGGACATCaagtttaacattaaaatgcattgtaatgTCAGTTTCTGAATCACAGTACATTACTAAATCTACATTTCCCTCAACTCTCCCATCTTGAACGAAACGTTTGATCTTGCGGTCCAATTGTTTTCACCACAGAAGATACAATAGACGTTGCCTGAAGAAACCGACATCAAAGAACATCACTCTTTTATGAAAATATCTGGATATTGGAACGCTTAGGTCAGATGAAGATGTAAAATCTGAAGCACCTTCTAAAAAGCCAACAGCAGCGCTCCAAAAAACTGAGCTGACATACACTCAAAGATGGCCCGACATCTGACCCTTGGTTTGGTGTGTCACTGAGATATCTCAGCGTATCCCTAAACTCAATAGCCCCTGCAGTTCCTTGAATATGCCTTAAATTGTTGCTCACCAGGTTTTGGATGGTTTTTAAGTACAAGGAAAGAGACTCTGCATTCAAAGGTcctgttaaaattaaataacatcaaCCCAGGAAAAGGAAATCAGTGGTGCTGATGCTGTGTTGCTATGGTGACGGAATGAGTCACGAGAGTtggtggtggtgggggggtTCTGTTCCTCTTGGCTCCAGCAGGTATCTCAGAGGAGAACAGGACAGTGACCTCATTTCTTACTAAACTCCATTCTTTTTTCCTGTTCTCTGCAGGCAGACCACCCTTTAGAGTTTCCCACTTCCTCTCTATTTCTACCTGTCCTTGTGCAGTGTAGTGGCCTACTTTGACAAACCttaagctggaaaaaaaaaaaaatcaggccaCGAAAGCTGTAGGCATACAGTGAACAGCTAATCCTGCTCCGTTTCTGGAGAACAGGATATACTGCAGcgttaaatacacacatgtgGAGAGTACGTTTAATTCTCAACCTGCAGGACACTGTGCTTCGGAtagcttttgcagcagctgtaTCTGTGGGTTGCGGCTCACCTGGGACTGAGTTGGGAATGGAGGGAGTGGGAACGGCGATGGGAATGCCAATGCTGCTGCCGCCACTGTTCTCTCGGCTGCCGCTGCCCCCGCTGCTGCCACTACAGGGTTCTCGGTCTCTGGTTGAGAGATGCAGTGCGTCCTGGACTGTGTTGGCTGCCCAAGCGAGCTGGACTTGTCATGTAATCGTTGGGCACCGTTGGAGGTTTCACCGGCTCAAGTGTTTTATAAGGAGTGTTA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU239843 lncRNA downstream 66701 10211151 ~ 10214096 (-) True G161981
TU239832 lncRNA downstream 121982 10135447 ~ 10158815 (-) True G161973
TU239685 lncRNA downstream 432937 9847393 ~ 9847860 (-) True G161878
TU239633 lncRNA downstream 818840 9430290 ~ 9461957 (-) True G161839
TU239627 lncRNA downstream 858766 9421690 ~ 9422031 (-) True G161833
TU239853 lncRNA upstream 3567 10290175 ~ 10294158 (-) True G161985
XR_006247923.1 lncRNA upstream 42061 10328669 ~ 10341363 (-) True LOC122329558
TU239901 lncRNA upstream 159431 10446039 ~ 10446427 (-) True G162020
TU239979 lncRNA upstream 266890 10553498 ~ 10554047 (-) True G162081
TU239999 lncRNA upstream 644912 10931520 ~ 10987703 (-) False dpp6a
XM_043226692.1 mRNA downstream 25411 10244342 ~ 10255386 (-) True acbd5a
XM_043226691.1 mRNA downstream 26834 10244342 ~ 10253963 (-) False acbd5a
XM_043226695.1 mRNA downstream 26914 10244342 ~ 10253883 (-) False acbd5a
XM_043226693.1 mRNA downstream 26914 10244342 ~ 10253883 (-) False acbd5a
XM_043226689.1 mRNA downstream 26915 10244342 ~ 10253882 (-) False acbd5a
XM_043226696.1 mRNA upstream 8168 10294776 ~ 10302071 (-) True pdss1
XM_043226697.1 mRNA upstream 8168 10294776 ~ 10302070 (-) False pdss1
XM_043226615.1 mRNA upstream 22636 10309244 ~ 10326983 (-) True LOC122329925
XM_043226883.1 mRNA upstream 61080 10347688 ~ 10365609 (-) True gad2
XM_043225714.1 mRNA upstream 79565 10366173 ~ 10436463 (-) True myo3a
TU239703 other downstream 347995 9931295 ~ 9932802 (-) True G161893
TU239150 other downstream 2874114 7390095 ~ 7406683 (-) False pard3aa
TU238971 other downstream 3183958 7090532 ~ 7096839 (-) False ralaa
TU238949 other downstream 3275389 6945186 ~ 7005408 (-) False G161327
TU238957 other downstream 3313198 6945186 ~ 6967599 (-) True G161327
TU239881 other upstream 109476 10396084 ~ 10413468 (-) False myo3a
XR_006247939.1 other upstream 164951 10451559 ~ 10458476 (-) False zgc:174877
XR_006247941.1 other upstream 167390 10453998 ~ 10458476 (-) False zgc:174877
XR_006247940.1 other upstream 167392 10454000 ~ 10458476 (-) False zgc:174877
TU240083 other upstream 1065453 11352061 ~ 11352859 (-) True G162152

Expression Profile