RNA id: TU239832



Basic Information


Item Value
RNA id TU239832
length 618
lncRNA type inter_gene
GC content 0.61
exon number 2
gene id G161973
representative True

Chromosome Information


Item Value
chromosome id NC_056722.1
NCBI id CM032091.1
chromosome length 21790128
location 10135447 ~ 10158815 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


cccgctagagacgctcacacgcacccactgccttcagcagcagactgcaagcaggagcattgcacccaccgccgtggaccgctcccgctgtacatgacaacatacaaacccgccaccgctgtggccaacacaggcaggagcattgcacccaccgccgtggaccgctcccgccgtatacgacaatatacaaacccgccaccaaggtggccaacacaggtaggagcattgcacccaccgccgtggaccgctcccgctgtacacgacaatatacaaacccgccaccgcagtggccaacacaggcaggagcattgcacccaccgctgtggaccgcttccactgtaaatgacattatacaaaacctgccaccgcagtggccaacacaggcaggagcattgcacccaccgccgtggaccgctcccgccgtagatgatggtatacaaaacccgccaccgcagtggccaacacaggcaggagcattgcacccaccgccgtggaccgctcccgccgtagatgatggtatacaaaacttgccaccgcagtggccaacacaggcaggagcattgcacccaccgccgtggaccgctcccgccagagacacacacacacacacacacacag

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU239685 lncRNA downstream 287587 9847393 ~ 9847860 (-) True G161878
TU239633 lncRNA downstream 673490 9430290 ~ 9461957 (-) True G161839
TU239627 lncRNA downstream 713416 9421690 ~ 9422031 (-) True G161833
TU239537 lncRNA downstream 1089540 9045613 ~ 9045907 (-) True G161758
TU239525 lncRNA downstream 1101164 9032121 ~ 9034283 (-) False G161751
TU239843 lncRNA upstream 52336 10211151 ~ 10214096 (-) True G161981
TU239853 lncRNA upstream 131360 10290175 ~ 10294158 (-) True G161985
XR_006247923.1 lncRNA upstream 169854 10328669 ~ 10341363 (-) True LOC122329558
TU239901 lncRNA upstream 287224 10446039 ~ 10446427 (-) True G162020
TU239979 lncRNA upstream 394683 10553498 ~ 10554047 (-) True G162081
XM_043226921.1 mRNA downstream 27390 10078801 ~ 10108057 (-) False dipk2ab
XM_043226919.1 mRNA downstream 27390 10078801 ~ 10108057 (-) True dipk2ab
XM_043226923.1 mRNA downstream 27394 10078801 ~ 10108053 (-) False dipk2ab
XM_043226922.1 mRNA downstream 27394 10078801 ~ 10108053 (-) False dipk2ab
XM_043227113.1 mRNA downstream 369183 9756149 ~ 9766264 (-) False LOC122330247
XM_043226450.1 mRNA upstream 15786 10174601 ~ 10177491 (-) True chst2b
XM_043226926.1 mRNA upstream 64280 10223095 ~ 10235432 (-) True pcolce2b
XM_043226692.1 mRNA upstream 85527 10244342 ~ 10255386 (-) True acbd5a
XM_043226691.1 mRNA upstream 85527 10244342 ~ 10253963 (-) False acbd5a
XM_043226695.1 mRNA upstream 85527 10244342 ~ 10253883 (-) False acbd5a
TU239703 other downstream 202645 9931295 ~ 9932802 (-) True G161893
TU239150 other downstream 2728764 7390095 ~ 7406683 (-) False pard3aa
TU238971 other downstream 3038608 7090532 ~ 7096839 (-) False ralaa
TU238949 other downstream 3130039 6945186 ~ 7005408 (-) False G161327
TU238957 other downstream 3167848 6945186 ~ 6967599 (-) True G161327
TU239863 other upstream 121982 10280797 ~ 10286608 (-) True G161992
TU239881 other upstream 237269 10396084 ~ 10413468 (-) False myo3a
XR_006247939.1 other upstream 292744 10451559 ~ 10458476 (-) False zgc:174877
XR_006247941.1 other upstream 295183 10453998 ~ 10458476 (-) False zgc:174877
XR_006247940.1 other upstream 295185 10454000 ~ 10458476 (-) False zgc:174877

Expression Profile