RNA id: TU252503


Basic Information

Item Value
RNA id TU252503
length 206
lncRNA type sense_over
GC content 0.47
exon number 2
gene id G170508
representative True

Chromosome Information

Item Value
chromosome id NW_025047681.1
NCBI id JAEQBD010000026.1
chromosome length 5200000
location 2030226 ~ 2084111 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

taagtgtccccaacaaagcaagccagaggcgacagcggcaaggaaacaaaaccccatccatacagaatggagaaaaaaaaaccttgggagaaaccagactcagttggggtcagttctcctctgaccggacgcccagcacttaacttccagttcaattttaaacacagctgtgtcagatagtgtaaatgacttagtgtgtgtgtgtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU252501 lncRNA upstream 5514 2023879 ~ 2024712 (+) False LOC122331469
TU252498 lncRNA upstream 77153 1952710 ~ 1953073 (+) True G170504
TU252472 lncRNA upstream 324841 1704650 ~ 1705385 (+) False LOC122331718
XR_006248280.1 lncRNA upstream 409269 1613706 ~ 1620957 (+) True LOC122331742
XR_006248277.1 lncRNA upstream 545001 1463637 ~ 1485225 (+) False LOC122331738
TU252670 lncRNA downstream 99292 2183403 ~ 2183627 (+) True G170639
TU252697 lncRNA downstream 136360 2220471 ~ 2220761 (+) True G170657
TU252702 lncRNA downstream 148036 2232147 ~ 2232355 (+) True G170662
TU252703 lncRNA downstream 151508 2235619 ~ 2235914 (+) True G170663
TU252729 lncRNA downstream 171601 2255712 ~ 2256070 (+) True G170673
XM_043228917.1 mRNA upstream 1062 2023510 ~ 2029164 (+) True LOC122331469
XM_043229235.1 mRNA upstream 316847 1710922 ~ 1713379 (+) True LOC122331724
XM_043229225.1 mRNA upstream 321866 1704578 ~ 1708360 (+) False LOC122331718
XM_043229226.1 mRNA upstream 321866 1704667 ~ 1708360 (+) True LOC122331718
XM_043229221.1 mRNA upstream 377644 1647762 ~ 1652582 (+) False LOC122331716
XM_043229212.1 mRNA downstream 10984 2095095 ~ 2104299 (+) True LOC122331711
XM_043229213.1 mRNA downstream 21742 2105853 ~ 2107989 (+) True LOC122331712
XM_043228920.1 mRNA downstream 58173 2142284 ~ 2145046 (+) True LOC122331475
XM_043228925.1 mRNA downstream 89382 2173493 ~ 2176462 (+) False LOC122331483
XM_043228926.1 mRNA downstream 89396 2173507 ~ 2178281 (+) True LOC122331483
TU252423 other upstream 520169 1464065 ~ 1510057 (+) True G170438
TU252426 other upstream 544841 1481336 ~ 1485385 (+) True LOC122331738
TU252427 other upstream 544841 1482894 ~ 1485385 (+) False LOC122331738
TU252416 other upstream 677584 1351676 ~ 1352642 (+) True G170431
TU252312 other upstream 924335 1105077 ~ 1105891 (+) True G170357
TU252659 other downstream 58169 2142280 ~ 2144513 (+) False LOC122331475
TU252772 other downstream 341046 2425157 ~ 2443584 (+) False LOC122331512
TU252742 other downstream 547266 2631377 ~ 2813039 (+) True G170683
XR_006248197.1 other downstream 768279 2852390 ~ 2897838 (+) False LOC122331570
XR_006248205.1 other downstream 768279 2852390 ~ 2897838 (+) False LOC122331570

Expression Profile