RNA id: TU269094


Basic Information

Item Value
RNA id TU269094
length 1253
RNA type TUCP
GC content 0.54
exon number 2
gene id G181349
representative True

Chromosome Information

Item Value
chromosome id NW_025048028.1
NCBI id JAEQBD010000373.1
chromosome length 1110666
location 596892 ~ 598645 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CAAATACCAATGATTCTGCTTGacgtttttatttacatctgtTGGAGTTCAACAAATTTGCACTGACTGCTGAGAGGAAAAGCAAGCGCGCTCTGGTCAAGATTCATTTCCCTGACCTGAAGCACCCGCGGGTATCAGCACGGCTTGAATAAAGGGCATGTTTACAGTGAGAATTTTAGGAATTTCATGCGTTCACTTTAACATCTTTATGTGTACAAACAGTGCTCAAAATAAATCCTCAGTGTATTTGTGCTTCCAGTTAAATGTGCCTCAATGCATTCTGGACAGAGTTGATTCTCCATGTCTTCATCTACCTCGTTGAGTCTTCTAGTCGACTTCTGCTTTTTTCAGGTACTTTTTCATCACCGAATTGACGTCCTCGCTGCCCTCGGCTTCCAGCCTCTCTCCTTGAGGCCCACGGCGCTTCTGGGATCCGCCAGAACTTGAAGAATCCGAGTCGGATTCCCTACGGGATGCTCTGGACGGCGGCAACTCCCCAAAGTGCACACTGAGGGCTCGTCTCTGGCCCGTTCGGGAGCTGCTAGATGCCAGGCTGCTGGTGGACTGCGCTCGTCGGATGGCTGGGAGAATGTCTGAGCTGGCGTCCCCTGCATCGACTCCGGCCCTCTCCTTGTCTTGGTTCCCAAGGAGTCGGCGATTCTGGAATACAAGGGGTTCCGATCCCAATTGCGACTCTCCCGTTTCTGCTACCAGGCCACCAAGTAGACGGCGTCGGATTGGTTGATAGGTGCCAAGGGGAGGCATGGCTTTCGAGCTGGGCTCCTCCTCGCCTTCTTCAGGGATGGCCAGGTTGGACAAGTGTCGGCGGGAACTTGCGGTGGAAGTCACGGATGCAAGGGAGTCGCAGGAGCTGAAGCGGTTCATCTTTCCTGTTGTGGTTGTGGTTGTGGAGGATGTTGGGCCTGACTCGGATAGAGAGCGGAGGCTGGAGGCACGAGGCAGGTGCGGACTGGGAGGTTTCAGTATGCCGGGTCGAGGCAGGTCTTCCAGACACTCCTCTGCTTCTAGAGACAGCGCTGAGGATCTGCGGCGTAGTGTGGAGGCTCCCGTCGTCTGATAGATGGGGAGGGACACTGCACTCCCCTCGCCTGCCTCTGAGCCTCTTTCCCACCCAGAACGCTTCTTCCTCAGACCCTCCAGAAGCTCAGATAGGGCTGTGGATGACGATGCTCTGCCTAGACCACCAGAACTTTCTTTGATGTCTTCGTCAAGGTCTTGCGTGCACGATCTGT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU269121 lncRNA downstream 9088 587406 ~ 587804 (-) True G181371
TU269119 lncRNA downstream 17252 578972 ~ 579640 (-) True G181369
TU269109 lncRNA downstream 31017 565368 ~ 565875 (-) True G181362
TU269106 lncRNA downstream 41268 554490 ~ 555624 (-) True G181359
TU269100 lncRNA downstream 86849 508169 ~ 510043 (-) True G181353
TU269152 lncRNA upstream 69120 667765 ~ 668266 (-) True G181397
TU269273 lncRNA upstream 113922 712567 ~ 717373 (-) True LOC122333763
XR_006248669.1 lncRNA upstream 115461 714106 ~ 716498 (-) False LOC122333763
TU269279 lncRNA upstream 120812 719457 ~ 720324 (-) True G181461
TU269283 lncRNA upstream 126589 725234 ~ 726424 (-) False tuba7l
XM_043231401.1 mRNA downstream 89844 502578 ~ 507048 (-) False crybb1
XM_043231403.1 mRNA downstream 92131 502578 ~ 504761 (-) True crybb1
XM_043231533.1 mRNA downstream 95166 496051 ~ 501726 (-) True acads
XM_043231409.1 mRNA downstream 114013 475111 ~ 482879 (-) True sept5b
XM_043231555.1 mRNA downstream 122578 447201 ~ 474314 (-) True mctp1b
XM_043231508.1 mRNA upstream 668 599313 ~ 601597 (-) True npm2b
XM_043231542.1 mRNA upstream 75490 674135 ~ 682898 (-) True tacr1b
XM_043231529.1 mRNA upstream 124509 723154 ~ 726562 (-) True tuba7l
XM_043231505.1 mRNA upstream 180583 779228 ~ 783680 (-) True purbb
XM_043231396.1 mRNA upstream 190599 789244 ~ 792617 (-) True ved
TU269072 other downstream 204970 388966 ~ 391922 (-) False cetn3
TU269042 other downstream 271037 257630 ~ 325855 (-) False LOC122333698
TU269158 other upstream 82423 681068 ~ 682862 (-) False tacr1b
TU269300 other upstream 152299 750944 ~ 754507 (-) True G181475
TU269313 other upstream 190598 789243 ~ 790846 (-) False ved
TU269392 other upstream 351324 949969 ~ 951651 (-) True G181544
TU269379 other upstream 364128 962773 ~ 966187 (-) False LOC122333748

Expression Profile