RNA id: TU269119



Basic Information


Item Value
RNA id TU269119
length 294
lncRNA type inter_gene
GC content 0.57
exon number 2
gene id G181369
representative True

Chromosome Information


Item Value
chromosome id NW_025048028.1
NCBI id JAEQBD010000373.1
chromosome length 1110666
location 578972 ~ 579640 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CTGCTCCTGCTGTTTGATTCTGGCAGTCATCTGACTGATCTCCTCCGAGCGCTCCTTGTCTCTGGTCTCCAGCTCACGGAGCTTCTTCTTCAGTTCAGGGATGGAGTCGGAGGTGAGGTGGAGCGGGATGCGCAGGTCATGGATCTGAGAGCACAGTTCCTCCTTCTGCTGCTGCAGTTTACAGACAGAGGACGCCTGGAGTTCACGGGCATGATCACAGATGGTGGAcgcttgacctttgacctcggCCCGTACCTTGAGCGTCTTGCGAAGGGTGAAGATCTCCGCACCGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU269109 lncRNA downstream 13097 565368 ~ 565875 (-) True G181362
TU269106 lncRNA downstream 23348 554490 ~ 555624 (-) True G181359
TU269100 lncRNA downstream 68929 508169 ~ 510043 (-) True G181353
XR_006248662.1 lncRNA downstream 140868 436048 ~ 438104 (-) True LOC122333706
XR_006248661.1 lncRNA downstream 140980 436048 ~ 437992 (-) False LOC122333706
TU269121 lncRNA upstream 7766 587406 ~ 587804 (-) True G181371
TU269152 lncRNA upstream 88125 667765 ~ 668266 (-) True G181397
TU269273 lncRNA upstream 132927 712567 ~ 717373 (-) True LOC122333763
XR_006248669.1 lncRNA upstream 134466 714106 ~ 716498 (-) False LOC122333763
TU269279 lncRNA upstream 139817 719457 ~ 720324 (-) True G181461
XM_043231401.1 mRNA downstream 71924 502578 ~ 507048 (-) False crybb1
XM_043231403.1 mRNA downstream 74211 502578 ~ 504761 (-) True crybb1
XM_043231533.1 mRNA downstream 77246 496051 ~ 501726 (-) True acads
XM_043231409.1 mRNA downstream 96093 475111 ~ 482879 (-) True sept5b
XM_043231556.1 mRNA downstream 104660 447201 ~ 474312 (-) False mctp1b
XM_043231508.1 mRNA upstream 19673 599313 ~ 601597 (-) True npm2b
XM_043231542.1 mRNA upstream 94495 674135 ~ 682898 (-) True tacr1b
XM_043231529.1 mRNA upstream 143514 723154 ~ 726562 (-) True tuba7l
XM_043231505.1 mRNA upstream 199588 779228 ~ 783680 (-) True purbb
XM_043231396.1 mRNA upstream 209604 789244 ~ 792617 (-) True ved
TU269072 other downstream 187050 388966 ~ 391922 (-) False cetn3
TU269042 other downstream 253117 257630 ~ 325855 (-) False LOC122333698
TU269094 other upstream 17252 596892 ~ 598645 (-) True G181349
TU269158 other upstream 101428 681068 ~ 682862 (-) False tacr1b
TU269300 other upstream 171304 750944 ~ 754507 (-) True G181475
TU269313 other upstream 209603 789243 ~ 790846 (-) False ved
TU269392 other upstream 370329 949969 ~ 951651 (-) True G181544

Expression Profile