RNA id: XM_043241302.1


Basic Information

Item Value
RNA id XM_043241302.1
length 2643
RNA type mRNA
GC content 0.43
exon number 12
gene id notum2
representative True

Chromosome Information

Item Value
chromosome id NC_056704.1
NCBI id CM032073.1
chromosome length 27473687
location 4834967 ~ 4841155 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTGTGTCATTGGTTGCAGCCCAGAGCTGGCACCAGCTCAAAGGGGATGTTGAGAAATGCAATCCATATGGTGGCACTATAAAATCTAGCACAGACCACAACCAAAGACCAAGATCTGTTCAGGACGCCGGCATAGCATCAATTCGAAAACCACTTTTTTGCTCTCCAAGACGCCCAGGGGACCAGGACCAGTTGTTTTAAGGGGGAGGTCCTGTTGGATTTGATATGAATATTCTGTGTCATTTTATGTTCCTGCTTCTGCTGGGAGTCATTTCTTGTCAGAACAACAATCGCAATGCCAAGTCAGGTGGAAAACCTGCAAAGAAGCCTAACAGCCAGGCTAAAGACATGACCCAGCATGGCCCTGAAGATGACCCAAACCCTGCGCTAGCAGGTGTTGGTGATTCCAGCAAAGAAACTAACTCTGGAGGTCGTGGCACCGCCCAACAAAGCGCATCTGTCAACAAGCCCATTGATGAAATGAAGCTGCACTTTCTTAAGAACACATTAGTGACTTGTAATGATGGTACTGCTGCTGGGTTTTACCTAAAGGAGTTCAAAGGAAGTAAGAGATGGCTGATATTTTTGGAAGGTGGTTGGTGCTGCTACAACAAAGAGACCTGCGATTCCAGATACAAAACTATCCCCCGCCTTATGAGCTCAGCTGACTGGCCACAGACACGCAAAGGAAGTGGCTTACTGTCAACACAAGTTGATGAAAATCCTCACTGGTATAATGCCAATATTGTGTTTGTTCCCTATTGTTCAAGTGATGTGTGGAGTGGTAACAAAGCAGTATCAAAGTCCAAACAGGCAAAAGAAACAGAATATGCTTTCATGGGATCTCAAATCATTCGGGAGGTCATCAAAGATCTTGCCCCAAAAGGACTGAAACAAGCCAAAGTTGTGATGTTAGCAGGAACAAGTGCCGGGGGAACAGGTGTGCTGCTGAACATTGATAAGGTGTCTAGTCTTCTGGAGCAGTTGGGGGCTGATGCTCAGGTTCGCGGCCTTGTTGACTCAGGCTGGTTTCTGGAGAGCAAACAGCAAAGAGCTCCTGATTGTCCAGACAGCGCCTCCTGCACCCCTGTGGATGCCATAAAAAAGGGACTTCGGTTGTGGAGTGGTATTGTTCCAGAAAAGTGCAAGCAGCAGTATAAAAGAGGAGAGGAATGGCAATGCTTTTTTGGACACAAACTGTACGCGTACATAAACGCTCCATTGTTTGTAGTTCAGTGGTTGTTTGATGAGGAACAGTTACGAGTGGAGAACATTTACATGGGCGTCCAATCGCTCTCGGAGCAGCAGCGGACCTACATGCAAAACCTGGGAAAAGAGTTTAAAAACTCTCTCAAAGATGTTACAGCTGTGTTCGCTCCTTCCTGTCTTTCCCACACTTTGATTACCAAAAGTAACTGGATGGATTTCCAGATCAAGGGGACGTCACTCTCTCGTGCTCTGCAGTGCTGGGACAGAAGTCTTCAGGAGGCTAACAAGAACAGCAAAACGCCTCTTAAGGGCTGTCCCTTTCATCTCATCGATAACTGCCAGTGGCCACAGTGCAACCCAACCTGTCCAGCCCTGATTGATCAGGCCACGCAACAGGAGATGACTCTGCTCCAGGTGCTGGCCAGTATGGGCTTGGACCTGCAAAAGCTCGGCTTGGATGTAAGCGGAGATATTTCGGCTAGCATGGCCAGCAGCGGTGGCTAAATTAGCATTAGCGGGCGGTGGTGTTCTCATCAACACAGTTCACCTCATCCACACTTTTTAGAGATTGTTCAGCGGCTTCCTCTCTGGCCACTTCCAGAGAAGGACCTGGGTTTGTCTAGTGAACATGTCACTGGATTTCAGTACCGACAGTCTGCCTTTACAACGGTGTTCTAGAATGATTTTGTGTTCTTCAAGTGAGCGACTCTAGCTAGACACAGTTAATCAATGGTTATTACAACTGCTAATCTAATTCATCACTTCAGTAAGAGAACTGGTGTCTGAATTCAATGCTTTAGCTAAAACTGACAACATCGTAGTGTACCAGCAAAATCAAAAAGAGCAAAatttattgttaactaaatcTGGAGAATGTACAAGTTCATAAACAACAAGGACATGTAGAAGGATGCTTATCTTTCAGTCACATTCTAGAGAAAAGCAGTGAGCAGTATAAcaacagttgtttttttgtgtgtttttttttttaagtatcaaGAAACCATAGCGCAGAAACCACATTTTTGTCTAACATCCTGTCATAATACATACTCTGTGTTATatatctgtattatttttagcaaGTGCATGCTGTTTTAGGACATTGTAGTCCATTTTGCAGACGAGAATcataaaaatgacacacattGATAATAGTGAATGGATAAATGTGGTATCTCTTTAATTTTGCCTTATAGCCTATATGAATAAGACATCCGAATGTCCTTAAAATATatcatgaaacaaaaacaacatctattttaaatataattatctcACATCCATATGATATTACTTGTTGCCATGTTACTTGTTTTCATGATATCTTTTGGCATTTATATTTGGTTTGACTCATCGTGAACACTAATAAAAGATGAATGAAAGCTTTTCATGAAGATGTTTAGACACCTGCtatctcagtgtgtgtgtgtgt

Function

GO: NA

KEGG:

id description
K19882 NOTUM; O-palmitoleoyl-L-serine hydrolase

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU63120 lncRNA downstream 112345 4722036 ~ 4722622 (-) False dnah9l
TU63118 lncRNA downstream 115042 4719185 ~ 4719925 (-) False dnah9l
TU63117 lncRNA downstream 120193 4713681 ~ 4714774 (-) False dnah9l
TU63111 lncRNA downstream 130464 4698903 ~ 4704503 (-) True G42644
TU63045 lncRNA downstream 329300 4503734 ~ 4505667 (-) True G42614
TU63308 lncRNA upstream 25972 4867127 ~ 4881387 (-) False LOC122346990
TU63306 lncRNA upstream 29972 4871127 ~ 4881387 (-) True LOC122346990
XR_006251189.1 lncRNA upstream 30091 4871246 ~ 4881393 (-) False LOC122346990
TU63300 lncRNA upstream 41632 4882787 ~ 4886316 (-) True sumo3a
TU63621 lncRNA upstream 292647 5133802 ~ 5228971 (-) True G42955
XM_043241090.1 mRNA downstream 3003 4829435 ~ 4831964 (-) True ccr7
XM_043242923.1 mRNA downstream 9501 4823936 ~ 4825466 (-) False LOC122347558
XM_043241566.1 mRNA downstream 15496 4812355 ~ 4819471 (-) False nfe2l2b
XM_043241565.1 mRNA downstream 15496 4812356 ~ 4819471 (-) False nfe2l2b
XM_043241564.1 mRNA downstream 15496 4812358 ~ 4819471 (-) True nfe2l2b
XM_043241272.1 mRNA upstream 7723 4848878 ~ 4850924 (-) True coq7
XM_043241940.1 mRNA upstream 42095 4883250 ~ 4886349 (-) False sumo3a
XM_043241939.1 mRNA upstream 46384 4887539 ~ 4891669 (-) True pttg1ipa
XM_043242882.1 mRNA upstream 52937 4894092 ~ 4938243 (-) True myo10l1
XM_043241766.1 mRNA upstream 115193 4956348 ~ 4991444 (-) False pcnt
TU63298 other downstream 9530 4818191 ~ 4825437 (-) False LOC122347558
TU63299 other downstream 9530 4818191 ~ 4825437 (-) True LOC122347558
XR_006251220.1 other downstream 60421 4768805 ~ 4774546 (-) False gpr155b
XR_006251142.1 other downstream 419754 4394407 ~ 4415213 (-) False cdk15
XR_006251246.1 other downstream 466723 4368161 ~ 4368244 (-) True LOC122347627
unassigned_transcript_1085 other upstream 114391 4955546 ~ 4955618 (-) True trnak-uuu_105
TU63628 other upstream 388301 5229456 ~ 5230710 (-) True G42958
XR_006251179.1 other upstream 781531 5622686 ~ 5639925 (-) False adam23a
XR_006251223.1 other upstream 850326 5691481 ~ 5699650 (-) True arl6ip6
TU63795 other upstream 890063 5731218 ~ 5736620 (-) False mylkb

Expression Profile