Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU48669 |
| length | 830 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 2 |
| gene id | G36155 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_035900.1 |
| NCBI id | CM008303.1 |
| chromosome length | 25652880 |
| location | 13325935 ~ 13336434 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| species | mexican tetra (Astyanax mexicanus) |
| id | name | namespace |
|---|---|---|
| GO:0017040 | N-acylsphingosine amidohydrolase activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU48666 | lncRNA | upstream | 365 | 13323174 ~ 13325570 (+) | True | G36154 |
| TU48658 | lncRNA | upstream | 14327 | 13307093 ~ 13311608 (+) | True | G36146 |
| TU48628 | lncRNA | upstream | 47579 | 13216784 ~ 13278356 (+) | True | G36129 |
| TU48604 | lncRNA | upstream | 371224 | 12954411 ~ 12954711 (+) | True | G36106 |
| TU48487 | lncRNA | upstream | 488615 | 12835279 ~ 12837320 (+) | True | G36011 |
| TU48680 | lncRNA | downstream | 56211 | 13392645 ~ 13394580 (+) | True | G36166 |
| TU48694 | lncRNA | downstream | 137720 | 13474154 ~ 13474794 (+) | True | G36177 |
| TU48692 | lncRNA | downstream | 138707 | 13475141 ~ 13477939 (+) | True | G36175 |
| TU48695 | lncRNA | downstream | 165812 | 13502246 ~ 13520560 (+) | False | LOC103039668 |
| TU48783 | lncRNA | downstream | 224694 | 13561128 ~ 13564733 (+) | True | G36244 |
| XM_022669132.1 | mRNA | upstream | 20077 | 13297548 ~ 13305858 (+) | True | psme2 |
| XM_007248745.3 | mRNA | upstream | 316262 | 12991143 ~ 13009673 (+) | True | pmp22 |
| XM_007248744.2 | mRNA | upstream | 349915 | 12964782 ~ 12976020 (+) | True | tekt3 |
| XM_022669126.1 | mRNA | upstream | 504661 | 12717653 ~ 12821274 (+) | False | LOC103024023 |
| XM_007260019.3 | mRNA | downstream | 16421 | 13352855 ~ 13359288 (+) | True | LOC103038526 |
| XM_022669136.1 | mRNA | downstream | 86603 | 13423037 ~ 13459971 (+) | True | heatr1 |
| XM_022669141.1 | mRNA | downstream | 124217 | 13460651 ~ 13471964 (+) | True | arg1 |
| XM_022669146.1 | mRNA | downstream | 164613 | 13501047 ~ 13508892 (+) | True | nudt13 |
| XM_022669147.1 | mRNA | downstream | 164808 | 13501242 ~ 13508892 (+) | False | nudt13 |
| TU48468 | other | upstream | 622879 | 12702305 ~ 12703056 (+) | True | G35995 |
| TU48402 | other | upstream | 759964 | 12551780 ~ 12565971 (+) | True | bnip3 |
| TU48418 | other | upstream | 954973 | 12366540 ~ 12370962 (+) | True | G35967 |
| TU48301 | other | upstream | 1523731 | 11801458 ~ 11802204 (+) | True | G35903 |
| TU48151 | other | upstream | 2324130 | 10994361 ~ 11001805 (+) | False | dock1 |
| TU48945 | other | downstream | 1126703 | 14463137 ~ 14463639 (+) | True | G36371 |
| TU49039 | other | downstream | 1452946 | 14789380 ~ 14790833 (+) | True | G36439 |
| TU49230 | other | downstream | 2096397 | 15432831 ~ 15440153 (+) | False | LOC103028998 |
| TU49796 | other | downstream | 3663948 | 17000382 ~ 17018884 (+) | False | sun1 |
| TU49797 | other | downstream | 3663948 | 17000382 ~ 17018884 (+) | False | sun1 |
