RNA id: CI01000004_05837208_05841141.mRNA



Basic Information


Item Value
RNA id CI01000004_05837208_05841141.mRNA
length 426
RNA type mRNA
GC content 0.45
exon number 4
gene id CI01000004_05837208_05841141
representative True

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 5837208 ~ 5841141 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GCCTGTCAGCGTAACTCCAGTTGACCCCTGCTGCTTACATAATCATGAGCTTTTCATTGAGGAAACTACTATGATGCATATACAGTTTCTCATCCTGGTTTTTTGGCTGAATCTTCACACTCTAACGGCATTCAGGAATGGGCAGGTGACTCAGGCATGCATGTCTATGACTCCTGAACATGGGAATAATGCCTCTACATTAGAACCTCCATATACTGTCACCTCAGATGCCTCTAACTACACAGATGGTCAGGTGATCACAGTGACACTACAAGCAAATGAGACTGGATTCAGGGGCTTTCTTCTTCAGGCCAGGGATGAGAAGGGTCCAGGCTCATCTGTCAGTCATACTTCAAATGATGACAAATCAAATATTGTGGTTCAGTGGAAAGCTCCGAGCAGTAACAACACAGATATTTGGTTCAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU31793 lncRNA upstream 115086 5717112 ~ 5722122 (+) True G28136
TU31677 lncRNA upstream 191793 5645177 ~ 5645415 (+) True G28023
TU31674 lncRNA upstream 195095 5641840 ~ 5642113 (+) True G28020
TU31672 lncRNA upstream 197276 5639731 ~ 5639932 (+) True G28018
TU31570 lncRNA upstream 255498 5481805 ~ 5581710 (+) True G27924
TU31843 lncRNA downstream 5335 5846476 ~ 5846828 (+) True G28178
TU31809 lncRNA downstream 40340 5881481 ~ 6018658 (+) False G28148
TU31824 lncRNA downstream 104557 5945698 ~ 5947048 (+) True G28159
TU31818 lncRNA downstream 110528 5951669 ~ 5953194 (+) True G28154
TU31811 lncRNA downstream 172438 6013579 ~ 6018658 (+) True G28148
CI01000004_05812640_05834517.mRNA mRNA upstream 2691 5812640 ~ 5834517 (+) True CI01000004_05812640_05834517
CI01000004_05800602_05802011.mRNA mRNA upstream 35121 5800602 ~ 5802087 (+) True CI01000004_05800602_05802011
CI01000004_05781905_05788633.mRNA mRNA upstream 47202 5781602 ~ 5790006 (+) True CI01000004_05781905_05788633
CI01000004_05735852_05752650.mRNA mRNA upstream 83197 5735798 ~ 5754011 (+) True CI01000004_05735852_05752650
CI01000004_05474127_05476501.mRNA mRNA upstream 360453 5473079 ~ 5476755 (+) True CI01000004_05474127_05476501
CI01000004_05870493_05877153.mRNA mRNA downstream 29352 5870493 ~ 5877442 (+) True CI01000004_05870493_05877153
CI01000004_05920907_05931169.mRNA mRNA downstream 79766 5920907 ~ 5931468 (+) True CI01000004_05920907_05931169
CI01000004_05936410_05942402.mRNA mRNA downstream 94037 5935178 ~ 5942505 (+) True CI01000004_05936410_05942402
CI01000004_05968468_05973840.mRNA mRNA downstream 127327 5968468 ~ 5973840 (+) True CI01000004_05968468_05973840
CI01000004_05995720_05996936.mRNA mRNA downstream 154579 5995720 ~ 5998165 (+) True CI01000004_05995720_05996936
TU31830 other upstream 104207 5732589 ~ 5733001 (+) True G28165
TU31414 other upstream 463405 5372825 ~ 5373803 (+) False G27805
TU32005 other downstream 628887 6470028 ~ 6502087 (+) True G28302
TU32079 other downstream 730079 6572819 ~ 6574421 (+) True G28354
TU32454 other downstream 1813631 7654772 ~ 7654879 (+) True G28706
TU32590 other downstream 2592564 8439958 ~ 8451227 (+) True G28818
TU32637 other downstream 2758094 8599235 ~ 8599603 (+) True G28859

Expression Profile