RNA id: CI01000004_07712175_07712384.mRNA



Basic Information


Item Value
RNA id CI01000004_07712175_07712384.mRNA
length 228
RNA type mRNA
GC content 0.50
exon number 1
gene id CI01000004_07712175_07712384
representative True

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 7712175 ~ 7712402 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CTGAACGCTGAAGTGATCGCAAAGCACCCAGAAGCGCTCTCGGTGCTCATCCTGGCACAGATGTCTTATAGGACCAGTGAATCTCTTCTATGTGGGTGCGGCACTCCTTTGTGGTCTACGTTGGTTCACCTTCCTGTGGACCCCATGATGTCGCAGTTTGAAGGACCAGTTTCCTGGACTCACTCCAGCTTCCTGAACTCAGTCTTGTAAATATATGAGGGCTTTACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU32496 lncRNA upstream 35678 7676292 ~ 7676497 (+) True G28737
TU32495 lncRNA upstream 36697 7674840 ~ 7675478 (+) True G28736
TU32494 lncRNA upstream 37547 7674397 ~ 7674628 (+) True G28735
TU32488 lncRNA upstream 45347 7666282 ~ 7666828 (+) False G28732
TU32512 lncRNA downstream 29906 7742308 ~ 7742597 (+) True G28752
TU32513 lncRNA downstream 30539 7742941 ~ 7743193 (+) True G28753
TU32514 lncRNA downstream 30814 7743216 ~ 7743709 (+) True G28754
TU32517 lncRNA downstream 40664 7753066 ~ 7753382 (+) True G28757
TU32521 lncRNA downstream 47107 7759509 ~ 7761023 (+) False CI01000004_07759670_07760529
CI01000004_07686845_07692184.mRNA mRNA upstream 19093 7686018 ~ 7693082 (+) True CI01000004_07686845_07692184
CI01000004_07654234_07655677.mRNA mRNA upstream 56394 7654234 ~ 7655781 (+) False CI01000004_07654234_07655677
CI01000004_07642418_07645369.mRNA mRNA upstream 66216 7642361 ~ 7645959 (+) False CI01000004_07642418_07645369
CI01000004_07585030_07601316.mRNA mRNA upstream 109462 7584727 ~ 7602713 (+) True CI01000004_07585030_07601316
CI01000004_07568950_07581744.mRNA mRNA upstream 129503 7568950 ~ 7582672 (+) True CI01000004_07568950_07581744
CI01000004_07759670_07760529.mRNA mRNA downstream 47216 7759618 ~ 7760997 (+) False CI01000004_07759670_07760529
CI01000004_07775338_07780352.mRNA mRNA downstream 62840 7775242 ~ 7781318 (+) True CI01000004_07775338_07780352
CI01000004_07823292_07824588.mRNA mRNA downstream 110434 7822836 ~ 7826203 (+) True CI01000004_07823292_07824588
CI01000004_07843003_07860951.mRNA mRNA downstream 130601 7843003 ~ 7862424 (+) True CI01000004_07843003_07860951
CI01000004_07868939_07899539.mRNA mRNA downstream 156218 7868620 ~ 7900206 (+) True CI01000004_07868939_07899539
TU32454 other upstream 55792 7654772 ~ 7654879 (+) True G28706
TU32079 other upstream 1137754 6572819 ~ 6574421 (+) True G28354
TU32005 other upstream 1210088 6470028 ~ 6502087 (+) True G28302
TU31830 other upstream 1979174 5732589 ~ 5733001 (+) True G28165
TU31418 other upstream 2338372 5372825 ~ 5373803 (+) True G27805
TU32590 other downstream 721303 8439958 ~ 8451227 (+) True G28818
TU32637 other downstream 886833 8599235 ~ 8599603 (+) True G28859
TU32792 other downstream 1264036 8976438 ~ 8980984 (+) False CI01000004_08976512_08980033
TU32793 other downstream 1264036 8976438 ~ 8980984 (+) True CI01000004_08976512_08980033
TU34813 other downstream 2784974 10497376 ~ 10497788 (+) True G30797

Expression Profile