Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000004_16490931_16555397.mRNA |
| length | 4703 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 39 |
| gene id | CI01000004_16490931_16555397 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 16490931 ~ 16555993 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | description |
|---|---|
| K20493 | LRRC16, CARMIL; leucine-rich repeat-containing protein 16 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU38905 | lncRNA | upstream | 18698 | 16472007 ~ 16472233 (+) | True | G34330 |
| TU38891 | lncRNA | upstream | 35305 | 16449680 ~ 16455626 (+) | True | G34323 |
| TU38889 | lncRNA | upstream | 41841 | 16448846 ~ 16449090 (+) | True | G34322 |
| TU38864 | lncRNA | upstream | 181625 | 16301233 ~ 16309306 (+) | True | G34297 |
| TU38831 | lncRNA | upstream | 310082 | 16180508 ~ 16180849 (+) | True | G34266 |
| TU38844 | lncRNA | downstream | 85349 | 16641342 ~ 16646222 (+) | True | G34277 |
| TU38937 | lncRNA | downstream | 109587 | 16665580 ~ 16672434 (+) | False | G34357 |
| TU38938 | lncRNA | downstream | 109587 | 16665580 ~ 16666345 (+) | False | G34357 |
| TU38939 | lncRNA | downstream | 109587 | 16665580 ~ 16672434 (+) | True | G34357 |
| TU38942 | lncRNA | downstream | 116551 | 16672544 ~ 16672767 (+) | True | G34359 |
| CI01000004_16467711_16471121.mRNA | mRNA | upstream | 19424 | 16467711 ~ 16471507 (+) | True | CI01000004_16467711_16471121 |
| CI01000004_16407140_16438873.mRNA | mRNA | upstream | 51681 | 16406985 ~ 16439250 (+) | True | CI01000004_16407140_16438873 |
| CI01000004_16346680_16401924.mRNA | mRNA | upstream | 89007 | 16346680 ~ 16401924 (+) | True | CI01000004_16346680_16401924 |
| CI01000004_16221780_16232426.mRNA | mRNA | upstream | 257991 | 16221780 ~ 16232940 (+) | True | CI01000004_16221780_16232426 |
| CI01000004_16217935_16218580.mRNA | mRNA | upstream | 272351 | 16217853 ~ 16218580 (+) | True | CI01000004_16217935_16218580 |
| CI01000004_16567132_16570668.mRNA | mRNA | downstream | 11139 | 16567132 ~ 16571368 (+) | True | CI01000004_16567132_16570668 |
| CI01000004_16579927_16586961.mRNA | mRNA | downstream | 23934 | 16579927 ~ 16587197 (+) | True | CI01000004_16579927_16586961 |
| CI01000004_16649360_16654303.mRNA | mRNA | downstream | 93178 | 16649171 ~ 16654353 (+) | True | CI01000004_16649360_16654303 |
| CI01000004_16695941_16729500.mRNA | mRNA | downstream | 139640 | 16695633 ~ 16729719 (+) | True | CI01000004_16695941_16729500 |
| CI01000004_16812706_16814956.mRNA | mRNA | downstream | 256713 | 16812706 ~ 16815068 (+) | True | CI01000004_16812706_16814956 |
| TU38340 | other | upstream | 424467 | 16063415 ~ 16066464 (+) | True | G33815 |
| TU38784 | other | upstream | 550981 | 15939357 ~ 15939950 (+) | True | G34220 |
| TU38554 | other | upstream | 1398962 | 15091244 ~ 15091969 (+) | True | CI01000004_15091390_15096502 |
| TU37521 | other | upstream | 2454031 | 14023547 ~ 14031127 (+) | True | G33092 |
| TU36655 | other | upstream | 3835220 | 12642754 ~ 12655711 (+) | True | G32314 |
| TU39001 | other | downstream | 421335 | 16977328 ~ 17025469 (+) | False | G34400 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00031363 | False | 7450 | mRNA | 0.46 | 40 | NC_007113.7 | 38742338 ~ 38890677 (+) |
