Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000006_04786488_04866122.mRNA |
| length | 4918 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 22 |
| gene id | CI01000006_04786488_04866122 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 4786425 ~ 4866504 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0016021 | integral component of membrane | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU47657 | lncRNA | upstream | 68651 | 4707993 ~ 4717337 (+) | True | G41971 |
| TU47656 | lncRNA | upstream | 85246 | 4700924 ~ 4701179 (+) | True | G41970 |
| TU47655 | lncRNA | upstream | 90712 | 4695206 ~ 4695713 (+) | True | G41969 |
| TU47651 | lncRNA | upstream | 99158 | 4687044 ~ 4687267 (+) | True | G41965 |
| TU47571 | lncRNA | upstream | 152224 | 4632573 ~ 4634201 (+) | True | G41885 |
| TU47692 | lncRNA | downstream | 103151 | 4969655 ~ 5039311 (+) | True | G42002 |
| TU47871 | lncRNA | downstream | 445528 | 5312032 ~ 5312639 (+) | True | G42181 |
| TU47873 | lncRNA | downstream | 448199 | 5314703 ~ 5314958 (+) | True | G42183 |
| TU47887 | lncRNA | downstream | 473217 | 5339721 ~ 5339921 (+) | True | G42197 |
| TU47907 | lncRNA | downstream | 525429 | 5391933 ~ 5392138 (+) | True | G42217 |
| CI01000006_04776793_04779651.mRNA | mRNA | upstream | 6738 | 4776793 ~ 4779687 (+) | True | CI01000006_04776793_04779651 |
| CI01000006_04703916_04717922.mRNA | mRNA | upstream | 68302 | 4702871 ~ 4718123 (+) | False | CI01000006_04703916_04717922 |
| CI01000006_04538991_04543506.mRNA | mRNA | upstream | 242821 | 4538991 ~ 4543604 (+) | True | CI01000006_04538991_04543506 |
| CI01000006_04509718_04523326.mRNA | mRNA | upstream | 262685 | 4509718 ~ 4523740 (+) | True | CI01000006_04509718_04523326 |
| CI01000006_04493236_04507301.mRNA | mRNA | upstream | 278227 | 4493236 ~ 4508198 (+) | True | CI01000006_04493236_04507301 |
| CI01000006_04931074_04985139.mRNA | mRNA | downstream | 64570 | 4931074 ~ 4986173 (+) | True | CI01000006_04931074_04985139 |
| CI01000006_04989318_04992332.mRNA | mRNA | downstream | 122814 | 4989318 ~ 4992841 (+) | True | CI01000006_04989318_04992332 |
| CI01000006_05169144_05174432.mRNA | mRNA | downstream | 301613 | 5168117 ~ 5175303 (+) | True | CI01000006_05169144_05174432 |
| CI01000006_05196006_05199842.mRNA | mRNA | downstream | 328828 | 5195332 ~ 5200579 (+) | True | CI01000006_05196006_05199842 |
| CI01000006_05276965_05313266.mRNA | mRNA | downstream | 410252 | 5276756 ~ 5314230 (+) | True | CI01000006_05276965_05313266 |
| TU47110 | other | upstream | 1050447 | 3734098 ~ 3734202 (+) | True | G41496 |
| TU47107 | other | upstream | 1050540 | 3734098 ~ 3734202 (+) | False | G41496 |
| TU47109 | other | upstream | 1050600 | 3729230 ~ 3734202 (+) | False | G41496 |
| TU47105 | other | upstream | 1050600 | 3734098 ~ 3734202 (+) | False | G41496 |
| TU47211 | other | upstream | 1947004 | 2836167 ~ 2839421 (+) | True | G41591 |
| TU47686 | other | downstream | 250702 | 5117206 ~ 5124149 (+) | True | G41996 |
| TU49835 | other | downstream | 903585 | 5770089 ~ 5771775 (+) | True | G43896 |
| TU49806 | other | downstream | 1241980 | 6108484 ~ 6108637 (+) | True | G43869 |
| TU49812 | other | downstream | 1255531 | 6128606 ~ 6128675 (+) | True | G43873 |
| TU50906 | other | downstream | 2300285 | 7169829 ~ 7170534 (+) | True | G44782 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00038604 | True | 4215 | mRNA | 0.55 | 18 | NC_007132.7 | 24703188 ~ 24865454 (-) |
| bowfin (Amia calva) | AMCG00004397 | True | 1065 | mRNA | 0.57 | 8 | CM030121.1 | 46627818 ~ 46657794 (+) |
