CI01000006_05276965_05313266


Basic Information

Item Value
gene id CI01000006_05276965_05313266
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 5276756 ~ 5314230 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_05276965_05313266.mRNA
CTATAAAGCACACATCCACCCTCTATGAGAGCTGTCAATCTTCTAGTTCACAACATAAGAGGAAAAGTAATAAATTCCATGTTATGATTTCTCATTTTGTCTCAGAACTCAAAACATCCTTTCTTAATCATTCCTGATTATAATAGTCTGCCTGCTGGGCACCCTGATGTCATCTGAAGGACTGGATGAATTAAGTCATTTATGGAAAAATGTACCTGAGCACATTCCTGACAAGACCACAAGTAGTTTTCTACAGAGATTTCCTTTTTGCCAATTCTGTTTCAGATAAATCGCAGCTGAAATTGGCAGAGAGCTTGGAGAAAAGAAGGGAAAGAGAGGGAGCCATCCGGCACGCTCCTAAGCCCCACTCAATGTCACGCCCTCAGAACCGGCTCCCGGGCGGCAAGAAAAAGCATTTCAGCAGTCACAGTGGGACCCACATTACCACATCTCCTCTATTAGCCTTCCTCACTAAAAAGGACCAGGCCTGGGCTGGCTGCAGAGCTGAGATCAGGCCCACTGGGTGTGGGGTACAGATGATTCATCAAGTCCTGCTTCATATAGAGGAATTCAATCAAGAGACAAGCAAGGCCGCGGTTCGGTTCCAGAGAACGAAGATGCCAAGTGAGAGAGAGGGGCGAGGGGGAACAGTGGGCCTTTCATTAAATGGTGAACAAGTCAGGGCTCTTCTGAAGGAGCTGCAGATTGCCGCAGCTAAAGCAGTGTCTTCACCCTGTTTGCTTTGCAAGGCCACTCGCCACAGTGAAAAACTTCGCTTCGTGCCCTGACCCCCTGCACGCTGCTGCCACTCTCTCCCGTATTGTCATAGCCCATCCTCTGGATTCAAGTGGGCAAACAAAGCCAGGATAACAAGCTCTATAAATGCTGACTAGGACTGCACGATTTTGAAGAAAAATGTGAGAACTTGTTAAATAATGTGGGTCATGGACGGTGCGTTTCAATTCAGCTTCAGAAAACATTGGAAGGCTTTCTAAAAGGATTCCGCATTTAATGTTTTTAAGGATCATTCTTACTCTAAAAGGGCACTTTATGTCAGCACTAGGTAGTGTTGTCAAAACTACTGACTTTGAAACCAAGTCTTTACTAAAATTTTAAAAATGCTTGTGCTTTGAGCACTGTTGAGCGGATTCAAAACACCTTTGATTGGCCATTGTGTTCACACGCTCAACAGATATGTCTGTGATTGGCTACAATGATCAACGCACAGGAGCGAAAGCACACAGAAGTGTTTGAATTTTAAAGCTTTTTGAAAGCAGGCGTCTATCAGCGGACCGTTCCACTGATAGACGCCTGCTTTCAAACGCTCCCGTGTGTATCTGTGCAAGCGCTCGGTGAAGAGCGTCATTGATGACTATTTACAGCATGTTTTTGAGGCTTTGATCACAGTAGCCAAATCACAGACATATCTGATGAGCACGTGAACACAATGGCCAATAAGAGGTGTTTACGAATACTACAGCACTCAAAGTGTCACATTTTTAAAATTTCAGTACCGACTTGGTACCGAAGTCGGTACTTTTGACAACACTAGTACTAGGCTAACTTAACATTGTTATTATAATGCAAGGTGTTATTTTGACATCAATATACAGTATGTGAACCAATCTTTAGACTTTATTTTAAAACAAATGGACTAAAAAGGGTTTCACGAGATGTAAGATGTCTTTTCAATTGTTAAAACAAAGCCGACCAGACAGTTGACACTGAAGGACTTTGAATACTGGGAAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_05276965_05313266.mRNA True 1752 mRNA 0.43 4 5276756 5314230

Neighbor

gene id symbol gene type direction distance location
CI01000006_05196006_05199842 NA coding upstream 76177 5195332 ~ 5200579 (+)
CI01000006_05169144_05174432 NA coding upstream 101453 5168117 ~ 5175303 (+)
CI01000006_04989318_04992332 SC5D coding upstream 283915 4989318 ~ 4992841 (+)
CI01000006_04931074_04985139 ARHGAP32, ARHGAP32B coding upstream 290583 4931074 ~ 4986173 (+)
CI01000006_04786488_04866122 IGSF9BB, IGSF9B coding upstream 410252 4786425 ~ 4866504 (+)
CI01000006_05380873_05439031 NA coding downstream 66089 5380319 ~ 5439517 (+)
CI01000006_05469329_05478118 NA coding downstream 154787 5469017 ~ 5478629 (+)
CI01000006_05617900_05693346 NCAM1, NCAM1A coding downstream 303670 5617900 ~ 5693346 (+)
CI01000006_05719079_05723838 NA coding downstream 404849 5719079 ~ 5724165 (+)
CI01000006_05729706_05734532 NA coding downstream 415038 5729268 ~ 5734668 (+)
G42002 NA non-coding upstream 237445 4969655 ~ 5039311 (+)
CI01000006_04703916_04717922 NA non-coding upstream 558982 4702871 ~ 4718123 (+)
G41970 NA non-coding upstream 575577 4700924 ~ 4701179 (+)
G41969 NA non-coding upstream 581043 4695206 ~ 4695713 (+)
G41965 NA non-coding upstream 589489 4687044 ~ 4687267 (+)
G42183 NA non-coding downstream 473 5314703 ~ 5314958 (+)
G42197 NA non-coding downstream 25491 5339721 ~ 5339921 (+)
G42217 NA non-coding downstream 77703 5391933 ~ 5392138 (+)
G42220 NA non-coding downstream 80689 5394919 ~ 5395288 (+)
G42223 NA non-coding downstream 83200 5397430 ~ 5397705 (+)
G41996 NA other upstream 152607 5117206 ~ 5124149 (+)
CI01000006_03734862_03735227 BANF1, BANF1.S, BANF1.L other upstream 1540778 3734554 ~ 3736035 (+)
G41591 NA other upstream 2437335 2836167 ~ 2839421 (+)
G41424 NA other upstream 2616186 2645662 ~ 2660570 (+)
G41170 NA other upstream 3580935 1692065 ~ 1695821 (+)
G43896 NA other downstream 455859 5770089 ~ 5771775 (+)
CI01000006_06104927_06109730 NA other downstream 794254 6104927 ~ 6109820 (+)
CI01000006_06122278_06122736 NA other downstream 807805 6122035 ~ 6122751 (+)
CI01000006_07167131_07168925 NA other downstream 1852559 7166778 ~ 7168925 (+)
G44872 NA other downstream 2042122 7356352 ~ 7387884 (+)

Expression


Co-expression Network