Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000006_07694812_07698078.mRNA |
| length | 1286 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 6 |
| gene id | CI01000006_07694812_07698078 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 7694812 ~ 7698434 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0003676 | nucleic acid binding | molecular_function |
| id | description |
|---|---|
| K18416 | THEX1, ERI1; 3'-5' exoribonuclease 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU51406 | lncRNA | upstream | 8636 | 7685958 ~ 7686176 (+) | True | G45233 |
| TU51340 | lncRNA | upstream | 11141 | 7648065 ~ 7683671 (+) | True | G45178 |
| TU51392 | lncRNA | upstream | 29056 | 7664893 ~ 7665756 (+) | True | G45219 |
| TU51343 | lncRNA | upstream | 46196 | 7607604 ~ 7648616 (+) | False | G45178 |
| TU51371 | lncRNA | downstream | 36375 | 7734809 ~ 7743460 (+) | False | G45201 |
| TU51373 | lncRNA | downstream | 36375 | 7734809 ~ 7743460 (+) | False | G45201 |
| TU51374 | lncRNA | downstream | 44117 | 7742551 ~ 7748959 (+) | True | G45201 |
| TU51420 | lncRNA | downstream | 120679 | 7819113 ~ 7819734 (+) | True | G45244 |
| TU51425 | lncRNA | downstream | 132728 | 7831162 ~ 7831407 (+) | True | G45249 |
| CI01000006_07692311_07693192.mRNA | mRNA | upstream | 695 | 7692240 ~ 7694117 (+) | True | CI01000006_07692311_07693192 |
| CI01000006_07577082_07582303.mRNA | mRNA | upstream | 112499 | 7576398 ~ 7582313 (+) | True | CI01000006_07577082_07582303 |
| CI01000006_07492187_07498391.mRNA | mRNA | upstream | 196138 | 7492187 ~ 7498674 (+) | True | CI01000006_07492187_07498391 |
| CI01000006_07486574_07490054.mRNA | mRNA | upstream | 204236 | 7485978 ~ 7490576 (+) | True | CI01000006_07486574_07490054 |
| CI01000006_07477200_07478617.mRNA | mRNA | upstream | 216026 | 7476928 ~ 7478786 (+) | True | CI01000006_07477200_07478617 |
| CI01000006_07699736_07726659.mRNA | mRNA | downstream | 1302 | 7699736 ~ 7726997 (+) | True | CI01000006_07699736_07726659 |
| CI01000006_07757777_07795187.mRNA | mRNA | downstream | 59092 | 7757526 ~ 7795258 (+) | True | CI01000006_07757777_07795187 |
| CI01000006_07939608_07940846.mRNA | mRNA | downstream | 240884 | 7939318 ~ 7941415 (+) | True | CI01000006_07939608_07940846 |
| CI01000006_08025159_08032131.mRNA | mRNA | downstream | 326725 | 8025159 ~ 8032623 (+) | True | CI01000006_08025159_08032131 |
| CI01000006_08108713_08122179.mRNA | mRNA | downstream | 410129 | 8108563 ~ 8122364 (+) | True | CI01000006_08108713_08122179 |
| TU51341 | other | upstream | 11141 | 7621991 ~ 7683671 (+) | False | G45178 |
| TU51004 | other | upstream | 306928 | 7356352 ~ 7387884 (+) | True | G44872 |
| TU50906 | other | upstream | 524278 | 7169829 ~ 7170534 (+) | True | G44782 |
| TU49812 | other | upstream | 1566137 | 6128606 ~ 6128675 (+) | True | G43873 |
| TU49806 | other | upstream | 1585224 | 6108484 ~ 6108637 (+) | True | G43869 |
| TU51448 | other | downstream | 185433 | 7883867 ~ 7920355 (+) | False | G45265 |
| TU51537 | other | downstream | 320908 | 8019342 ~ 8021951 (+) | True | G45336 |
| TU51558 | other | downstream | 461082 | 8159516 ~ 8159528 (+) | False | G45351 |
| TU51555 | other | downstream | 499447 | 8197881 ~ 8199702 (+) | False | CI01000006_08198328_08199463 |
| TU51552 | other | downstream | 500410 | 8198844 ~ 8198909 (+) | False | G45351 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00038443 | True | 1469 | mRNA | 0.42 | 7 | NC_007132.7 | 19907769 ~ 19915757 (-) |
