Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000006_07577082_07582303.mRNA |
| length | 1789 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 4 |
| gene id | CI01000006_07577082_07582303 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 7576398 ~ 7582313 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0016787 | hydrolase activity | molecular_function |
| id | description |
|---|---|
| K04459 | DUSP, MKP; dual specificity MAP kinase phosphatase |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU51315 | lncRNA | upstream | 22064 | 7554097 ~ 7554334 (+) | True | G45154 |
| TU51312 | lncRNA | upstream | 26388 | 7549799 ~ 7550010 (+) | True | G45151 |
| TU51309 | lncRNA | upstream | 32329 | 7543813 ~ 7544069 (+) | True | G45148 |
| TU51307 | lncRNA | upstream | 34540 | 7541654 ~ 7541858 (+) | True | G45146 |
| TU51297 | lncRNA | upstream | 52768 | 7523397 ~ 7523630 (+) | True | G45136 |
| TU51335 | lncRNA | downstream | 15067 | 7597380 ~ 7597757 (+) | True | G45174 |
| TU51336 | lncRNA | downstream | 15880 | 7598193 ~ 7598590 (+) | True | G45175 |
| TU51293 | lncRNA | downstream | 16523 | 7598836 ~ 7599365 (+) | True | G45132 |
| TU51345 | lncRNA | downstream | 21372 | 7603685 ~ 7604821 (+) | True | G45179 |
| TU51343 | lncRNA | downstream | 25291 | 7607604 ~ 7648616 (+) | False | G45178 |
| CI01000006_07492187_07498391.mRNA | mRNA | upstream | 77724 | 7492187 ~ 7498674 (+) | True | CI01000006_07492187_07498391 |
| CI01000006_07486574_07490054.mRNA | mRNA | upstream | 85822 | 7485978 ~ 7490576 (+) | True | CI01000006_07486574_07490054 |
| CI01000006_07477200_07478617.mRNA | mRNA | upstream | 97612 | 7476928 ~ 7478786 (+) | True | CI01000006_07477200_07478617 |
| CI01000006_07458458_07460310.mRNA | mRNA | upstream | 116088 | 7458113 ~ 7460310 (+) | False | CI01000006_07458458_07460310 |
| CI01000006_07328380_07352585.mRNA | mRNA | upstream | 223261 | 7327983 ~ 7353137 (+) | True | CI01000006_07328380_07352585 |
| CI01000006_07692311_07693192.mRNA | mRNA | downstream | 109927 | 7692240 ~ 7694117 (+) | True | CI01000006_07692311_07693192 |
| CI01000006_07694812_07698078.mRNA | mRNA | downstream | 112499 | 7694812 ~ 7698434 (+) | True | CI01000006_07694812_07698078 |
| CI01000006_07699736_07726659.mRNA | mRNA | downstream | 117423 | 7699736 ~ 7726997 (+) | True | CI01000006_07699736_07726659 |
| CI01000006_07757777_07795187.mRNA | mRNA | downstream | 175213 | 7757526 ~ 7795258 (+) | True | CI01000006_07757777_07795187 |
| CI01000006_07939608_07940846.mRNA | mRNA | downstream | 357005 | 7939318 ~ 7941415 (+) | True | CI01000006_07939608_07940846 |
| TU51004 | other | upstream | 188514 | 7356352 ~ 7387884 (+) | True | G44872 |
| TU50906 | other | upstream | 405864 | 7169829 ~ 7170534 (+) | True | G44782 |
| TU49812 | other | upstream | 1447723 | 6128606 ~ 6128675 (+) | True | G43873 |
| TU49806 | other | upstream | 1466810 | 6108484 ~ 6108637 (+) | True | G43869 |
| TU49835 | other | upstream | 1804623 | 5770089 ~ 5771775 (+) | True | G43896 |
| TU51341 | other | downstream | 39678 | 7621991 ~ 7683671 (+) | False | G45178 |
| TU51448 | other | downstream | 301554 | 7883867 ~ 7920355 (+) | False | G45265 |
| TU51537 | other | downstream | 437029 | 8019342 ~ 8021951 (+) | True | G45336 |
| TU51558 | other | downstream | 577203 | 8159516 ~ 8159528 (+) | False | G45351 |
| TU51555 | other | downstream | 615568 | 8197881 ~ 8199702 (+) | False | CI01000006_08198328_08199463 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00038449 | True | 1816 | mRNA | 0.47 | 4 | NC_007132.7 | 20113470 ~ 20120543 (-) |
