Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000006_07477200_07478617.mRNA |
| length | 1260 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 3 |
| gene id | CI01000006_07477200_07478617 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 7476928 ~ 7478786 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0005215 | transporter activity | molecular_function |
| id | description |
|---|---|
| K18271 | RBP4; retinol-binding protein 4 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU51277 | lncRNA | upstream | 4022 | 7472702 ~ 7472906 (+) | True | G45116 |
| TU51272 | lncRNA | upstream | 15908 | 7460905 ~ 7461020 (+) | True | G45111 |
| TU50991 | lncRNA | upstream | 150986 | 7325698 ~ 7325942 (+) | True | G44859 |
| TU50982 | lncRNA | upstream | 156233 | 7320374 ~ 7320695 (+) | False | G44850 |
| TU50981 | lncRNA | upstream | 156233 | 7320441 ~ 7320695 (+) | True | G44850 |
| TU51281 | lncRNA | downstream | 523 | 7479309 ~ 7479512 (+) | True | G45120 |
| TU51283 | lncRNA | downstream | 2903 | 7481689 ~ 7481888 (+) | True | G45122 |
| TU51295 | lncRNA | downstream | 42372 | 7521158 ~ 7522043 (+) | True | G45134 |
| TU51296 | lncRNA | downstream | 43457 | 7522243 ~ 7522618 (+) | True | G45135 |
| TU51297 | lncRNA | downstream | 44611 | 7523397 ~ 7523630 (+) | True | G45136 |
| CI01000006_07458458_07460310.mRNA | mRNA | upstream | 16618 | 7458113 ~ 7460310 (+) | False | CI01000006_07458458_07460310 |
| CI01000006_07328380_07352585.mRNA | mRNA | upstream | 123791 | 7327983 ~ 7353137 (+) | True | CI01000006_07328380_07352585 |
| CI01000006_07254728_07260352.mRNA | mRNA | upstream | 216494 | 7254261 ~ 7260434 (+) | True | CI01000006_07254728_07260352 |
| CI01000006_07249033_07250723.mRNA | mRNA | upstream | 226033 | 7248438 ~ 7250895 (+) | True | CI01000006_07249033_07250723 |
| CI01000006_07243073_07247934.mRNA | mRNA | upstream | 228906 | 7243073 ~ 7248022 (+) | True | CI01000006_07243073_07247934 |
| CI01000006_07486574_07490054.mRNA | mRNA | downstream | 7192 | 7485978 ~ 7490576 (+) | True | CI01000006_07486574_07490054 |
| CI01000006_07492187_07498391.mRNA | mRNA | downstream | 13401 | 7492187 ~ 7498674 (+) | True | CI01000006_07492187_07498391 |
| CI01000006_07577082_07582303.mRNA | mRNA | downstream | 97612 | 7576398 ~ 7582313 (+) | True | CI01000006_07577082_07582303 |
| CI01000006_07692311_07693192.mRNA | mRNA | downstream | 213454 | 7692240 ~ 7694117 (+) | True | CI01000006_07692311_07693192 |
| CI01000006_07694812_07698078.mRNA | mRNA | downstream | 216026 | 7694812 ~ 7698434 (+) | True | CI01000006_07694812_07698078 |
| TU51004 | other | upstream | 89044 | 7356352 ~ 7387884 (+) | True | G44872 |
| TU50906 | other | upstream | 306394 | 7169829 ~ 7170534 (+) | True | G44782 |
| TU49812 | other | upstream | 1348253 | 6128606 ~ 6128675 (+) | True | G43873 |
| TU49806 | other | upstream | 1367340 | 6108484 ~ 6108637 (+) | True | G43869 |
| TU49835 | other | upstream | 1705153 | 5770089 ~ 5771775 (+) | True | G43896 |
| TU51341 | other | downstream | 143205 | 7621991 ~ 7683671 (+) | False | G45178 |
| TU51448 | other | downstream | 405081 | 7883867 ~ 7920355 (+) | False | G45265 |
| TU51537 | other | downstream | 540556 | 8019342 ~ 8021951 (+) | True | G45336 |
| TU51558 | other | downstream | 680730 | 8159516 ~ 8159528 (+) | False | G45351 |
| TU51555 | other | downstream | 719095 | 8197881 ~ 8199702 (+) | False | CI01000006_08198328_08199463 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00038455 | True | 1459 | mRNA | 0.43 | 6 | NC_007132.7 | 20339143 ~ 20342096 (-) |
| bowfin (Amia calva) | AMCG00010285 | True | 612 | mRNA | 0.53 | 4 | CM030129.1 | 23044054 ~ 23047441 (-) |
