RNA id: TU114081



Basic Information


Item Value
RNA id TU114081
length 261
lncRNA type intronic
GC content 0.37
exon number 1
gene id G100255
representative True

Chromosome Information


Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 10132995 ~ 10133255 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTATTGTAGTGTTTGCCTTTCTGTTACTAATAATATAAAAGCAAATGTACTATAATACTTTTTCATTAACAGTTCTATTTAGTAACGTATTAGGCAAAACTGTTAAACAGAGACCATAACTAATGAAGACAGAGAATGGAAGCGCTGTGTGCTCAGGCGCTGCCGTTCTCAGAGCTGGTGACAAAATAAAAGTCCCGCTTCCAACACATTGGCCAAACAGAAAAACTCATCGGCCAATACCGATATTTTAAAAATGCCAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU114074 lncRNA downstream 16424 10116322 ~ 10116571 (-) True G100249
TU114071 lncRNA downstream 17404 10115332 ~ 10115591 (-) True G100247
TU114064 lncRNA downstream 37115 10095586 ~ 10095880 (-) True G100240
TU114063 lncRNA downstream 40835 10091744 ~ 10092160 (-) True G100239
TU114060 lncRNA downstream 49362 10083319 ~ 10083633 (-) True G100236
TU114082 lncRNA upstream 2593 10135848 ~ 10136074 (-) True G100256
TU114105 lncRNA upstream 64463 10197718 ~ 10198034 (-) True G100278
TU114110 lncRNA upstream 98407 10231662 ~ 10232146 (-) True G100283
TU114113 lncRNA upstream 107046 10240301 ~ 10240525 (-) True G100286
TU114114 lncRNA upstream 107931 10241186 ~ 10241465 (-) True G100287
CI01000016_10025722_10027148.mRNA mRNA downstream 105736 10025502 ~ 10027259 (-) True CI01000016_10025722_10027148
CI01000016_09959197_09962175.mRNA mRNA downstream 169810 9957922 ~ 9963185 (-) False CI01000016_09959197_09962175
CI01000016_09739013_09746676.mRNA mRNA downstream 386319 9739013 ~ 9746676 (-) True CI01000016_09739013_09746676
CI01000016_09654611_09661197.mRNA mRNA downstream 471798 9653502 ~ 9661197 (-) True CI01000016_09654611_09661197
CI01000016_09638800_09651752.mRNA mRNA downstream 481243 9638592 ~ 9651752 (-) True CI01000016_09638800_09651752
CI01000016_10228314_10299064.mRNA mRNA upstream 95059 10228314 ~ 10299064 (-) True CI01000016_10228314_10299064
CI01000016_10386099_10386648.mRNA mRNA upstream 252570 10385825 ~ 10387482 (-) True CI01000016_10386099_10386648
CI01000016_10443526_10488009.mRNA mRNA upstream 309590 10442845 ~ 10488186 (-) True CI01000016_10443526_10488009
CI01000016_10571262_10572444.mRNA mRNA upstream 437450 10570705 ~ 10573868 (-) True CI01000016_10571262_10572444
CI01000016_10600154_10633808.mRNA mRNA upstream 465947 10599202 ~ 10633808 (-) True CI01000016_10600154_10633808
TU114011 other downstream 80606 10051168 ~ 10052389 (-) True G100190
TU112845 other downstream 318040 9814361 ~ 9814955 (-) True G99178
TU112535 other downstream 620567 9511357 ~ 9511415 (-) True G98896
TU112534 other downstream 620633 9511357 ~ 9511415 (-) False G98896

Expression Profile