RNA id: TU118143


Basic Information

Item Value
RNA id TU118143
length 385
lncRNA type antisense_over
GC content 0.55
exon number 2
gene id G103867
representative True

Chromosome Information

Item Value
chromosome id CI01000018
NCBI id null
chromosome length 7078422
location 2115946 ~ 2116423 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AGTCTCCACAGGTGTCAGGATCCTCCTGTACCTGAGCGTCAGTCACCACATCAACCCGCAGCCCTTCATCCTCCAGAGCCACATCATCAGGTGACATCACACAGGTCTCCACCGCAATGGTGCTCAGCTCTTCGTCATCATCTGAGCATGGCACATACTCCGCCACCACATCCTCGATGGCTTCCTGGATGACCAGCTCCTCATGGGCGAGGCCGTGCACGGCAATCTTCTCACCCTCCACGTCAGAGACGAGAACCGACTCCTGCAGTTCTACCACCACCTCATCTTCTCCATCACCCTCTTCTGTCCCATGGAATATGATCTTAGGCTCATGGGAATGGAGAGAGAGAGCCGTCACATCTTCATCCATTGTCTCCACTGGTCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU118168 lncRNA downstream 89834 2025886 ~ 2026112 (-) True G103892
TU118165 lncRNA downstream 93342 2022286 ~ 2022604 (-) True G103889
TU118161 lncRNA downstream 111339 2004342 ~ 2004607 (-) True G103885
TU118126 lncRNA downstream 129863 1985871 ~ 1986083 (-) True G103855
TU118118 lncRNA downstream 130211 1969251 ~ 1985735 (-) True G103847
TU118205 lncRNA upstream 84199 2200622 ~ 2200950 (-) True G103929
TU118207 lncRNA upstream 86787 2203210 ~ 2203567 (-) True G103931
TU118215 lncRNA upstream 120436 2236859 ~ 2239022 (-) True G103939
TU118221 lncRNA upstream 148789 2265212 ~ 2265446 (-) True G103944
TU118240 lncRNA upstream 183388 2299811 ~ 2302001 (-) True G103961
CI01000018_02080382_02098031.mRNA mRNA downstream 17644 2080332 ~ 2098302 (-) True CI01000018_02080382_02098031
CI01000018_02069280_02070789.mRNA mRNA downstream 44715 2069280 ~ 2071231 (-) True CI01000018_02069280_02070789
CI01000018_01707576_01707950.mRNA mRNA downstream 407566 1707060 ~ 1708380 (-) True CI01000018_01707576_01707950
CI01000018_01583609_01585366.mRNA mRNA downstream 529777 1582910 ~ 1586169 (-) True CI01000018_01583609_01585366
CI01000018_01307800_01363530.mRNA mRNA downstream 752013 1306982 ~ 1363933 (-) True CI01000018_01307800_01363530
CI01000018_02125709_02126759.mRNA mRNA upstream 8687 2125110 ~ 2126817 (-) True CI01000018_02125709_02126759
CI01000018_02129101_02134686.mRNA mRNA upstream 11970 2128393 ~ 2134686 (-) True CI01000018_02129101_02134686
CI01000018_02135812_02137218.mRNA mRNA upstream 19327 2135750 ~ 2137218 (-) True CI01000018_02135812_02137218
CI01000018_02138741_02148435.mRNA mRNA upstream 22221 2138644 ~ 2148435 (-) True CI01000018_02138741_02148435
CI01000018_02195642_02198053.mRNA mRNA upstream 77758 2194181 ~ 2199400 (-) False CI01000018_02195642_02198053
TU118112 other downstream 155888 1959497 ~ 1960058 (-) True G103842
TU118149 other upstream 269785 2386208 ~ 2400903 (-) True G103873
TU119324 other upstream 1365681 3482104 ~ 3500514 (-) True G104968
TU119461 other upstream 1891274 4007697 ~ 4017817 (-) False G105104
TU119464 other upstream 1891274 4007697 ~ 4010575 (-) True G105104
TU119577 other upstream 2127044 4243467 ~ 4246010 (-) True G105200

Expression Profile