Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000026_10458602_10465979.mRNA |
| length | 2922 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 15 |
| gene id | CI01000026_10458602_10465979 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000026 |
| NCBI id | null |
| chromosome length | 17172400 |
| location | 10458602 ~ 10466513 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0003676 | nucleic acid binding | molecular_function |
| id | description |
|---|---|
| K13123 | GPATCH1; G patch domain-containing protein 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU151606 | lncRNA | upstream | 71358 | 10387042 ~ 10387244 (+) | True | G133344 |
| TU151601 | lncRNA | upstream | 76844 | 10381554 ~ 10381758 (+) | True | G133339 |
| TU151600 | lncRNA | upstream | 77053 | 10381254 ~ 10381549 (+) | True | G133338 |
| TU151598 | lncRNA | upstream | 84647 | 10373398 ~ 10373955 (+) | True | G133336 |
| TU151513 | lncRNA | upstream | 103125 | 10354819 ~ 10355477 (+) | True | CI01000026_10351923_10354175 |
| TU151635 | lncRNA | downstream | 48907 | 10515420 ~ 10515648 (+) | True | G133373 |
| TU151646 | lncRNA | downstream | 86447 | 10552960 ~ 10628076 (+) | True | G133383 |
| TU151669 | lncRNA | downstream | 318279 | 10784792 ~ 10785562 (+) | True | G133406 |
| TU151685 | lncRNA | downstream | 419540 | 10886053 ~ 10895159 (+) | True | G133420 |
| TU151691 | lncRNA | downstream | 440962 | 10907475 ~ 10907675 (+) | True | G133426 |
| CI01000026_10455059_10456945.mRNA | mRNA | upstream | 1039 | 10455059 ~ 10457563 (+) | True | CI01000026_10455059_10456945 |
| CI01000026_10453245_10454111.mRNA | mRNA | upstream | 4426 | 10453125 ~ 10454176 (+) | True | CI01000026_10453245_10454111 |
| CI01000026_10351923_10354175.mRNA | mRNA | upstream | 101907 | 10351403 ~ 10356695 (+) | False | CI01000026_10351923_10354175 |
| CI01000026_10315650_10317985.mRNA | mRNA | upstream | 140612 | 10315079 ~ 10317990 (+) | False | CI01000026_10315650_10317985 |
| CI01000026_10265012_10268157.mRNA | mRNA | upstream | 190054 | 10264945 ~ 10268548 (+) | True | CI01000026_10265012_10268157 |
| CI01000026_10468478_10482863.mRNA | mRNA | downstream | 1965 | 10468478 ~ 10482955 (+) | True | CI01000026_10468478_10482863 |
| CI01000026_10521984_10543018.mRNA | mRNA | downstream | 55471 | 10521984 ~ 10543108 (+) | True | CI01000026_10521984_10543018 |
| CI01000026_10547566_10588420.mRNA | mRNA | downstream | 80758 | 10547271 ~ 10589071 (+) | True | CI01000026_10547566_10588420 |
| CI01000026_10634025_10634327.mRNA | mRNA | downstream | 166941 | 10633454 ~ 10635525 (+) | True | CI01000026_10634025_10634327 |
| CI01000026_10640494_10646504.mRNA | mRNA | downstream | 173981 | 10640494 ~ 10646840 (+) | True | CI01000026_10640494_10646504 |
| TU151441 | other | upstream | 296641 | 10159819 ~ 10161961 (+) | True | G133192 |
| TU150881 | other | upstream | 889442 | 9568739 ~ 9569160 (+) | False | G132667 |
| TU149067 | other | upstream | 1951815 | 8501408 ~ 8506787 (+) | True | G131077 |
| TU148972 | other | upstream | 2159188 | 8298573 ~ 8299414 (+) | False | CI01000026_08297901_08307596 |
| TU148937 | other | upstream | 2269529 | 8188374 ~ 8189073 (+) | True | G130967 |
| TU151694 | other | downstream | 604255 | 11070768 ~ 11070876 (+) | True | G133429 |
| TU151777 | other | downstream | 778420 | 11244933 ~ 11255073 (+) | True | G133497 |
| TU151829 | other | downstream | 1009604 | 11476117 ~ 11476907 (+) | False | G133542 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00066351 | False | 3161 | mRNA | 0.48 | 19 | NC_007118.7 | 38265363 ~ 38277255 (+) |
