RNA id: TU149067



Basic Information


Item Value
RNA id TU149067
length 1132
RNA type TUCP
GC content 0.47
exon number 7
gene id G131077
representative True

Chromosome Information


Item Value
chromosome id CI01000026
NCBI id null
chromosome length 17172400
location 8501408 ~ 8506787 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATAAAAAGCAAAACTTGCGAACTTTATTTCAAATACTGTGTTGATATTGTGCAGTGGTGCATTCCAGTTCTTGTTCCTGCTTGCCCACTCACGGTTTAATGCTGATTAGTTCTCTGAAGTTTTCTGGGGCATTGCTTCGGTTTCGTCTTTCTGCTTCTATTTTTTCACTAGTCCAGGTCATCTGGTTTTTCTCTGGTAATACTTCAATGGTTTCCTCTTCTTCATCTGAATACAAACTGCCCATTCTGATCAGCGAGTGTCTATCCTTCACTAGTTGGGCCTCTCTGTCTCTCTCTGCACTGGAGAGCCTCATTTGTTTTAGCATCTGTGACCTCTGTTCCATCATCAGTGTCCGCTCATACGTATATGCCGAGATGTCGCTGTCGTGCATCTCAACCACTTCCACCTCTGCTTCTAATCTCAGCTGATACAGGAAGGTTGCCAGGTCCTTCTTCATCTGAATACTGTTATCGTCCATTTGAGCCACAGTGAAGATTCGCATCTTACATTTACGCCAGACCTTATGTTGTTTGAGAAGGAAAGGCAGGAGCATGAGCATTCCACCATCATGGACAATCCACCAGACATCAATATATCCATCAGTAAAGCGCTCATGATTGCTGGGATAGAATGACACGTTTTTTGGGACCATCAGAGCCAGGTGGGCAGCAGTAGTACAGCGGACTGTATTAATAAAGGTTTTCCAAGCCCGTGGGTCTTCACTCTGTCTCCAGCCATATGGCCAACCCATAACAACTGTGTTGTGCTTCATTCCTCCCAGACCACAGGACTGGATCAGATGTGCGATCCCCTCTCTCACTTTGGAGGCAACCACCACCTGACAAAAGCCCTTCACCCGCTCAATCTCCATCATGTTCTTTATTGCCTGTTCTGATGCTTGTGTTTCCCCATAGCATTCCAGGAAGTTGCCCTGTATCACAGAACCTACAATGGTTAGGCCTTTTCCTGCCTTCAGCTGTGAGGCAAAGGTAAGCATTCTGGGATACTTTACATGTAGGTCCTCATCCAACTTCAGCAAAACCAGCAGCTGTGGCCTCCAGTTTTTGGTGTGGGGAGGTCCAGCTTCCAGGCGAAGGAGTGCGTAACGGGCGGCACTAAGAGACAATCCACG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU149045 lncRNA upstream 3416 8486471 ~ 8497992 (+) False G131071
TU149047 lncRNA upstream 3416 8486471 ~ 8497992 (+) False G131071
TU149053 lncRNA upstream 3416 8486471 ~ 8497992 (+) False G131071
TU149052 lncRNA upstream 3416 8489984 ~ 8497992 (+) True G131071
TU149090 lncRNA upstream 47168 8454013 ~ 8454240 (+) True G131098
TU149101 lncRNA downstream 13987 8520774 ~ 8521442 (+) True G131108
TU149979 lncRNA downstream 64315 8571102 ~ 8571332 (+) True G131859
TU149981 lncRNA downstream 65511 8572298 ~ 8572531 (+) True G131861
TU149992 lncRNA downstream 66684 8573471 ~ 8573841 (+) True G131872
TU149993 lncRNA downstream 67337 8574124 ~ 8574323 (+) True G131873
CI01000026_08474877_08483134.mRNA mRNA upstream 18140 8474877 ~ 8483268 (+) True CI01000026_08474877_08483134
CI01000026_08454661_08461606.mRNA mRNA upstream 39487 8454661 ~ 8461921 (+) True CI01000026_08454661_08461606
CI01000026_08447474_08449558.mRNA mRNA upstream 50797 8447396 ~ 8450611 (+) True CI01000026_08447474_08449558
CI01000026_08421799_08434134.mRNA mRNA upstream 67215 8421683 ~ 8434193 (+) True CI01000026_08421799_08434134
CI01000026_08313929_08318869.mRNA mRNA upstream 182517 8311795 ~ 8318891 (+) True CI01000026_08313929_08318869
CI01000026_08944583_08947981.mRNA mRNA downstream 437739 8944526 ~ 8947993 (+) True CI01000026_08944583_08947981
CI01000026_08950735_08960908.mRNA mRNA downstream 443876 8950663 ~ 8961146 (+) True CI01000026_08950735_08960908
CI01000026_09076625_09079154.mRNA mRNA downstream 568429 9075216 ~ 9079338 (+) True CI01000026_09076625_09079154
CI01000026_09175446_09178464.mRNA mRNA downstream 668462 9175249 ~ 9178488 (+) True CI01000026_09175446_09178464
CI01000026_09339450_09352303.mRNA mRNA downstream 832663 9339450 ~ 9353177 (+) True CI01000026_09339450_09352303
TU148972 other upstream 201994 8298573 ~ 8299414 (+) False CI01000026_08297901_08307596
TU148937 other upstream 312335 8188374 ~ 8189073 (+) True G130967
TU148442 other upstream 1404756 7095053 ~ 7096652 (+) True G130552
TU146291 other upstream 2174623 6326196 ~ 6326785 (+) False G128757
TU146290 other upstream 2174623 6326278 ~ 6326785 (+) True G128757
TU150881 other downstream 1061952 9568739 ~ 9569160 (+) False G132667
TU151441 other downstream 1653032 10159819 ~ 10161961 (+) True G133192
TU151694 other downstream 2563981 11070768 ~ 11070876 (+) True G133429
TU151777 other downstream 2738146 11244933 ~ 11255073 (+) True G133497
TU151829 other downstream 2969330 11476117 ~ 11476907 (+) False G133542

Expression Profile