RNA id: TU325659


Basic Information

Item Value
RNA id TU325659
length 303
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G287273
representative True

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 5344253 ~ 5344555 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GCTTTCTGAAGCGAAGCGATGGGTTTTTGTAAGAAAAATATCAATATTTAAAACTTTATTAACTATAATAACTAGCTTCCAGCAGACGGCCATACGCATCGATTTGCAGAGGAAGAGTGACCTCTGACCCTGACACATAACGTGATGAAGAATGCGGAAGCGCAGAGGATAGATCAAAACTAAACACCGGTCACAAATTAGAAGTCTAAAACAAGAAATTTTAAAGAGAAATATAGGAGTATTTCGATAAAAGAGAAGATGAGCTTGAGTTTGTTGTACAGCCCTATTTTTTTGAACCACAAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU325606 lncRNA downstream 49494 5292257 ~ 5294759 (-) True G287234
TU325608 lncRNA downstream 55897 5284086 ~ 5288356 (-) False G287234
TU325600 lncRNA downstream 75788 5268174 ~ 5268465 (-) True G287230
TU325583 lncRNA downstream 176526 5167483 ~ 5167727 (-) True G287213
TU325580 lncRNA downstream 182011 5161859 ~ 5162242 (-) True G287210
TU325661 lncRNA upstream 31235 5375790 ~ 5376098 (-) True G287275
TU325662 lncRNA upstream 38118 5382673 ~ 5382999 (-) True G287276
TU325664 lncRNA upstream 59640 5404195 ~ 5404619 (-) True G287278
TU325665 lncRNA upstream 60232 5404787 ~ 5404987 (-) True G287279
TU325669 lncRNA upstream 63095 5407650 ~ 5408014 (-) True G287283
CI01000072_05298324_05299101.mRNA mRNA downstream 45127 5298211 ~ 5299126 (-) True CI01000072_05298324_05299101
CI01000072_05277286_05281467.mRNA mRNA downstream 62557 5277041 ~ 5281696 (-) True CI01000072_05277286_05281467
CI01000072_05268621_05275350.mRNA mRNA downstream 68610 5268553 ~ 5275643 (-) True CI01000072_05268621_05275350
CI01000072_05208841_05218652.mRNA mRNA downstream 125601 5208841 ~ 5218652 (-) True CI01000072_05208841_05218652
CI01000072_05172707_05173819.mRNA mRNA downstream 169588 5172679 ~ 5174665 (-) True CI01000072_05172707_05173819
CI01000072_05353426_05366845.mRNA mRNA upstream 8321 5352876 ~ 5366947 (-) True CI01000072_05353426_05366845
CI01000072_05396600_05399519.mRNA mRNA upstream 51985 5396540 ~ 5399777 (-) True CI01000072_05396600_05399519
TU325381 other downstream 950030 4386145 ~ 4394223 (-) True G287021
TU324366 other downstream 1368186 3970270 ~ 3976067 (-) False G286205
TU324361 other downstream 1368251 3970270 ~ 3976002 (-) False G286205
TU325650 other upstream 36165 5380720 ~ 5382001 (-) True G287264

Expression Profile