RNA id: TU325662


Basic Information

Item Value
RNA id TU325662
length 327
lncRNA type intronic
GC content 0.34
exon number 1
gene id G287276
representative True

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 5382673 ~ 5382999 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CAACAATATACAGATGATCTGAAGGCTCAATAGTGCCTCAGCAGTGCCACAGGCTGATCACTTCCATGCCACACTTCAGTGATGCAGTAATTTGTGCTAGGAGCAAGTCATTTGCTGTAATATGTCCTGCCGATCAAGTATTGAGTGCACAAAAGAACATACTTTAAAGAACTTGAACTTTTCTGTTTTGCAAATCCATTTTTTGATTGATCTTAGGAAATATTCTAATATTTTGAAATACTGGATTTTGGACTTTCATGAGCTGTACGCTCTAATCATCAAAATTAAAAAAAAAAAAACTTTTGAAATGTTTTACTTTACATGTAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU325661 lncRNA downstream 6575 5375790 ~ 5376098 (-) True G287275
TU325659 lncRNA downstream 38118 5344253 ~ 5344555 (-) True G287273
TU325606 lncRNA downstream 87914 5292257 ~ 5294759 (-) True G287234
TU325608 lncRNA downstream 94317 5284086 ~ 5288356 (-) False G287234
TU325600 lncRNA downstream 114208 5268174 ~ 5268465 (-) True G287230
TU325664 lncRNA upstream 21196 5404195 ~ 5404619 (-) True G287278
TU325665 lncRNA upstream 21788 5404787 ~ 5404987 (-) True G287279
TU325669 lncRNA upstream 24651 5407650 ~ 5408014 (-) True G287283
TU325670 lncRNA upstream 25045 5408044 ~ 5408269 (-) True G287284
TU325671 lncRNA upstream 25474 5408473 ~ 5408809 (-) True G287285
CI01000072_05353426_05366845.mRNA mRNA downstream 15726 5352876 ~ 5366947 (-) True CI01000072_05353426_05366845
CI01000072_05298324_05299101.mRNA mRNA downstream 83547 5298211 ~ 5299126 (-) True CI01000072_05298324_05299101
CI01000072_05277286_05281467.mRNA mRNA downstream 100977 5277041 ~ 5281696 (-) True CI01000072_05277286_05281467
CI01000072_05268621_05275350.mRNA mRNA downstream 107030 5268553 ~ 5275643 (-) True CI01000072_05268621_05275350
CI01000072_05208841_05218652.mRNA mRNA downstream 164021 5208841 ~ 5218652 (-) True CI01000072_05208841_05218652
CI01000072_05396600_05399519.mRNA mRNA upstream 13541 5396540 ~ 5399777 (-) True CI01000072_05396600_05399519
TU325650 other downstream 672 5380720 ~ 5382001 (-) True G287264
TU325381 other downstream 988450 4386145 ~ 4394223 (-) True G287021
TU324366 other downstream 1406606 3970270 ~ 3976067 (-) False G286205
TU324361 other downstream 1406671 3970270 ~ 3976002 (-) False G286205

Expression Profile