RNA id: TU325670


Basic Information

Item Value
RNA id TU325670
length 226
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G287284
representative True

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 5408044 ~ 5408269 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTCAAGTAGGCTTTAATGTCACACAGTTGCGTTTTAAGACTTTTTGTAAGAAAATATGCAAGTTTAAAACTCAGTTTAAGGACCCTGATGCAACTCATGGGCATGACGTATGGCAAAACAGCTTGTAAGAAAAGAGACACAAATACAAACACACCCTATATACAGCAACAGTTTAGTCAGGTCCCATTCAAACCCACACGCTGCTGTCCATTAGTGTGACAAAATC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU325669 lncRNA downstream 30 5407650 ~ 5408014 (-) True G287283
TU325665 lncRNA downstream 3057 5404787 ~ 5404987 (-) True G287279
TU325664 lncRNA downstream 3425 5404195 ~ 5404619 (-) True G287278
TU325662 lncRNA downstream 25045 5382673 ~ 5382999 (-) True G287276
TU325661 lncRNA downstream 31946 5375790 ~ 5376098 (-) True G287275
TU325671 lncRNA upstream 204 5408473 ~ 5408809 (-) True G287285
TU325681 lncRNA upstream 17833 5426102 ~ 5426417 (-) True G287295
TU325682 lncRNA upstream 18477 5426746 ~ 5427034 (-) True G287296
TU325687 lncRNA upstream 40889 5449158 ~ 5449457 (-) True G287301
TU325688 lncRNA upstream 42235 5450504 ~ 5450708 (-) True G287302
CI01000072_05396600_05399519.mRNA mRNA downstream 8267 5396540 ~ 5399777 (-) True CI01000072_05396600_05399519
CI01000072_05353426_05366845.mRNA mRNA downstream 41097 5352876 ~ 5366947 (-) True CI01000072_05353426_05366845
CI01000072_05298324_05299101.mRNA mRNA downstream 108918 5298211 ~ 5299126 (-) True CI01000072_05298324_05299101
CI01000072_05277286_05281467.mRNA mRNA downstream 126348 5277041 ~ 5281696 (-) True CI01000072_05277286_05281467
CI01000072_05268621_05275350.mRNA mRNA downstream 132401 5268553 ~ 5275643 (-) True CI01000072_05268621_05275350
TU325650 other downstream 26043 5380720 ~ 5382001 (-) True G287264
TU325381 other downstream 1013821 4386145 ~ 4394223 (-) True G287021
TU324366 other downstream 1431977 3970270 ~ 3976067 (-) False G286205

Expression Profile