RNA id: TU325681


Basic Information

Item Value
RNA id TU325681
length 316
lncRNA type antisense_over
GC content 0.48
exon number 1
gene id G287295
representative True

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 5426102 ~ 5426417 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GCCTCCACTCCTCCGCTCGCCTCTCTTTTATCCCCGTCCCTCCCCACCAGACAGGCTGATAGACACTCGAAGGTTGAGACGGTCATACAGAACAGGTATGTGTGAAGATCTTGCACCAAAGACTTCACACAAAGTCGGATTAGCATGGGCACAGGGAGTGAAATGATTGCTGGATCAATGGCAGATGTATTGACTGAATATTCAAGTGTGTCATTAAGACGGAGATTTAGATAGATCAAGTTCATTCGACACACACACACACACACACCCACCCACACACACACACAAAGAGAGAGAGAGACTCACCGGGTTCTCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU325671 lncRNA downstream 17293 5408473 ~ 5408809 (-) True G287285
TU325670 lncRNA downstream 17833 5408044 ~ 5408269 (-) True G287284
TU325669 lncRNA downstream 18088 5407650 ~ 5408014 (-) True G287283
TU325665 lncRNA downstream 21115 5404787 ~ 5404987 (-) True G287279
TU325664 lncRNA downstream 21483 5404195 ~ 5404619 (-) True G287278
TU325682 lncRNA upstream 329 5426746 ~ 5427034 (-) True G287296
TU325687 lncRNA upstream 22741 5449158 ~ 5449457 (-) True G287301
TU325688 lncRNA upstream 24087 5450504 ~ 5450708 (-) True G287302
CI01000072_05396600_05399519.mRNA mRNA downstream 26325 5396540 ~ 5399777 (-) True CI01000072_05396600_05399519
CI01000072_05353426_05366845.mRNA mRNA downstream 59155 5352876 ~ 5366947 (-) True CI01000072_05353426_05366845
CI01000072_05298324_05299101.mRNA mRNA downstream 126976 5298211 ~ 5299126 (-) True CI01000072_05298324_05299101
CI01000072_05277286_05281467.mRNA mRNA downstream 144406 5277041 ~ 5281696 (-) True CI01000072_05277286_05281467
CI01000072_05268621_05275350.mRNA mRNA downstream 150459 5268553 ~ 5275643 (-) True CI01000072_05268621_05275350
TU325650 other downstream 44101 5380720 ~ 5382001 (-) True G287264
TU325381 other downstream 1031879 4386145 ~ 4394223 (-) True G287021
TU324366 other downstream 1450035 3970270 ~ 3976067 (-) False G286205

Expression Profile