RNA id: TU325687


Basic Information

Item Value
RNA id TU325687
length 300
lncRNA type intronic
GC content 0.36
exon number 1
gene id G287301
representative True

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 5449158 ~ 5449457 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CAAAGCTTGTAGTTAGATGTGTTCTTTGTGTCTAATAATGGCCATAACCCATCCAGGTTTTTTGTTCTGTTTGCAAAAGATTAACTACCCATGTCTGCAAAAACAGATGGTTCTCTGAAAACTTAAATGAAAGCTAAAATGGAAACAGTGGCCAGCTGGTCCTCTCTTAATCAATAAGGATTAAAGTCAACTTAAAATCAAAATTGACTTTCCCGTTTACTTTCTTAAAATGCATTCCTTGTCTTGGTCGCACACTGTTCAAATAAAAACATTTCTATAGAGGGTATGCATAGACGTCAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU325682 lncRNA downstream 22124 5426746 ~ 5427034 (-) True G287296
TU325681 lncRNA downstream 22741 5426102 ~ 5426417 (-) True G287295
TU325671 lncRNA downstream 40349 5408473 ~ 5408809 (-) True G287285
TU325670 lncRNA downstream 40889 5408044 ~ 5408269 (-) True G287284
TU325669 lncRNA downstream 41144 5407650 ~ 5408014 (-) True G287283
TU325688 lncRNA upstream 1047 5450504 ~ 5450708 (-) True G287302
CI01000072_05396600_05399519.mRNA mRNA downstream 49381 5396540 ~ 5399777 (-) True CI01000072_05396600_05399519
CI01000072_05353426_05366845.mRNA mRNA downstream 82211 5352876 ~ 5366947 (-) True CI01000072_05353426_05366845
CI01000072_05298324_05299101.mRNA mRNA downstream 150032 5298211 ~ 5299126 (-) True CI01000072_05298324_05299101
CI01000072_05277286_05281467.mRNA mRNA downstream 167462 5277041 ~ 5281696 (-) True CI01000072_05277286_05281467
CI01000072_05268621_05275350.mRNA mRNA downstream 173515 5268553 ~ 5275643 (-) True CI01000072_05268621_05275350
TU325650 other downstream 67157 5380720 ~ 5382001 (-) True G287264
TU325381 other downstream 1054935 4386145 ~ 4394223 (-) True G287021
TU324366 other downstream 1473091 3970270 ~ 3976067 (-) False G286205

Expression Profile