RNA id: TU325682



Basic Information


Item Value
RNA id TU325682
length 289
lncRNA type intronic
GC content 0.45
exon number 1
gene id G287296
representative True

Chromosome Information


Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 5426746 ~ 5427034 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TACACATTCAGAGCTGCACTCAAAATATACTGCTCTCTCCTCTCAGTCTCTCTATTTCAGTCTCTCCCTCTCTGTCCTTCCATTTCTAAAGCATATTCACATAACACTAAGCTTTATTACATAAACAAAAGCACCTGCATAAACAGGCAGACACACAGGGCCTGATTATGCTGTTCCTCTAATGTGGCCCTGTCCTTCAGTTAGAGAGAGCCGACCATTCACTTTGTAGTTGCAGATGCGATGGGGGGAAATCATTGGTTAGACTCTGCCTGGCAAAGCACAGCCCTAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU325681 lncRNA downstream 329 5426102 ~ 5426417 (-) True G287295
TU325671 lncRNA downstream 17937 5408473 ~ 5408809 (-) True G287285
TU325670 lncRNA downstream 18477 5408044 ~ 5408269 (-) True G287284
TU325669 lncRNA downstream 18732 5407650 ~ 5408014 (-) True G287283
TU325665 lncRNA downstream 21759 5404787 ~ 5404987 (-) True G287279
TU325687 lncRNA upstream 22124 5449158 ~ 5449457 (-) True G287301
TU325688 lncRNA upstream 23470 5450504 ~ 5450708 (-) True G287302
CI01000072_05396600_05399519.mRNA mRNA downstream 26969 5396540 ~ 5399777 (-) True CI01000072_05396600_05399519
CI01000072_05353426_05366845.mRNA mRNA downstream 59799 5352876 ~ 5366947 (-) True CI01000072_05353426_05366845
CI01000072_05298324_05299101.mRNA mRNA downstream 127620 5298211 ~ 5299126 (-) True CI01000072_05298324_05299101
CI01000072_05277286_05281467.mRNA mRNA downstream 145050 5277041 ~ 5281696 (-) True CI01000072_05277286_05281467
CI01000072_05268621_05275350.mRNA mRNA downstream 151103 5268553 ~ 5275643 (-) True CI01000072_05268621_05275350
TU325650 other downstream 44745 5380720 ~ 5382001 (-) True G287264
TU325381 other downstream 1032523 4386145 ~ 4394223 (-) True G287021
TU324366 other downstream 1450679 3970270 ~ 3976067 (-) False G286205

Expression Profile