RNA id: TU325664


Basic Information

Item Value
RNA id TU325664
length 425
lncRNA type inter_gene
GC content 0.49
exon number 1
gene id G287278
representative True

Chromosome Information

Item Value
chromosome id CI01000072
NCBI id null
chromosome length 5473029
location 5404195 ~ 5404619 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GATAGTGGCCTTCAGCTCTTCTGCATTGTTGGGTCTGGCATATCGCATCTTCCTCTTCACAATACCCCATAGATTTTCTATGGGGTTAAGGTCAGGCGAGTTTGCTGGCCAATTAAGAACAGGGATACCATGGTCCTTAAACCAGGTACTGGTAGCTTTGGCACTGTGTGCAGGTGCCAAGTCCTGTTGGAAAATGAAATCTGCATCTCCATAAAGTTGGTCAGCAGCAGGAAGCATGAAGTGCTCTAAAACTTCCTGGTATATGGCTGCGTTGACCTTGAACCTCAGAAAACACAGTGGACCAACACCAGCAGATGACATGGCACCCCAAACCATCACTGACTGTGGAAACTTTACACCGGACCTCAAGCAACGTGGATTGTGTGCCTCTCCTCTCTTCCTCCAGACTCTGGGACCCTGATTTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU325662 lncRNA downstream 21196 5382673 ~ 5382999 (-) True G287276
TU325661 lncRNA downstream 28097 5375790 ~ 5376098 (-) True G287275
TU325659 lncRNA downstream 59640 5344253 ~ 5344555 (-) True G287273
TU325606 lncRNA downstream 109436 5292257 ~ 5294759 (-) True G287234
TU325608 lncRNA downstream 115839 5284086 ~ 5288356 (-) False G287234
TU325665 lncRNA upstream 168 5404787 ~ 5404987 (-) True G287279
TU325669 lncRNA upstream 3031 5407650 ~ 5408014 (-) True G287283
TU325670 lncRNA upstream 3425 5408044 ~ 5408269 (-) True G287284
TU325671 lncRNA upstream 3854 5408473 ~ 5408809 (-) True G287285
TU325681 lncRNA upstream 21483 5426102 ~ 5426417 (-) True G287295
CI01000072_05396600_05399519.mRNA mRNA downstream 4418 5396540 ~ 5399777 (-) True CI01000072_05396600_05399519
CI01000072_05353426_05366845.mRNA mRNA downstream 37248 5352876 ~ 5366947 (-) True CI01000072_05353426_05366845
CI01000072_05298324_05299101.mRNA mRNA downstream 105069 5298211 ~ 5299126 (-) True CI01000072_05298324_05299101
CI01000072_05277286_05281467.mRNA mRNA downstream 122499 5277041 ~ 5281696 (-) True CI01000072_05277286_05281467
CI01000072_05268621_05275350.mRNA mRNA downstream 128552 5268553 ~ 5275643 (-) True CI01000072_05268621_05275350
TU325650 other downstream 22194 5380720 ~ 5382001 (-) True G287264
TU325381 other downstream 1009972 4386145 ~ 4394223 (-) True G287021
TU324366 other downstream 1428128 3970270 ~ 3976067 (-) False G286205

Expression Profile