RNA id: TU328255


Basic Information

Item Value
RNA id TU328255
length 204
lncRNA type inter_gene
GC content 0.38
exon number 2
gene id G289416
representative True

Chromosome Information

Item Value
chromosome id CI01000075
NCBI id null
chromosome length 1642109
location 1079500 ~ 1079727 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CAAAGTCCCTTTAAGACAAGTCAACGCCTCTCGGGCATCCTGGGCATCATGCAGCTCCTATCTCTTTGAATGGGGAAACATCAAATTCTCCAAAGCTGTTTGCCAAGCTTTTGATTAAATTTCATATTTGAAATCACCAATGAAATCTGACAACAACTGTCTCATAATTTTTTTTTCCAAACGCTCAAATCATGACAAAAAAAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU328051 lncRNA downstream 74806 1004386 ~ 1004694 (-) True G289244
TU327980 lncRNA downstream 138450 940694 ~ 941050 (-) False G289183
TU327981 lncRNA downstream 138486 940694 ~ 941014 (-) True G289183
TU328022 lncRNA downstream 156684 922576 ~ 922816 (-) True G289218
TU328018 lncRNA downstream 165396 913686 ~ 914104 (-) True G289216
TU328302 lncRNA upstream 30609 1110336 ~ 1110699 (-) True G289461
TU328253 lncRNA upstream 74321 1154048 ~ 1161145 (-) True G289414
TU328332 lncRNA upstream 195513 1275240 ~ 1275457 (-) True G289490
TU328336 lncRNA upstream 215571 1295298 ~ 1315293 (-) True G289493
TU328352 lncRNA upstream 242419 1322146 ~ 1323050 (-) True G289509
CI01000075_00952466_00992777.mRNA mRNA downstream 86723 952139 ~ 992777 (-) True CI01000075_00952466_00992777
CI01000075_00885681_00895778.mRNA mRNA downstream 183722 885427 ~ 895778 (-) False CI01000075_00885681_00895778
CI01000075_00749894_00757773.mRNA mRNA downstream 320945 749842 ~ 758555 (-) True CI01000075_00749894_00757773
CI01000075_00686719_00747700.mRNA mRNA downstream 331800 685131 ~ 747700 (-) True CI01000075_00686719_00747700
CI01000075_00649702_00654404.mRNA mRNA downstream 424896 649420 ~ 654604 (-) False CI01000075_00649702_00654404
CI01000075_01161238_01161465.mRNA mRNA upstream 81465 1161192 ~ 1161465 (-) True CI01000075_01161238_01161465
CI01000075_01166008_01203828.mRNA mRNA upstream 85225 1164952 ~ 1203828 (-) True CI01000075_01166008_01203828
CI01000075_01206857_01230864.mRNA mRNA upstream 127130 1206857 ~ 1230864 (-) True CI01000075_01206857_01230864
CI01000075_01335455_01336921.mRNA mRNA upstream 255015 1334742 ~ 1337484 (-) True CI01000075_01335455_01336921
CI01000075_01343318_01346352.mRNA mRNA upstream 263564 1343291 ~ 1346352 (-) False CI01000075_01343318_01346352
TU327958 other downstream 291101 770094 ~ 788399 (-) True G289167
TU327838 other downstream 751183 324523 ~ 328317 (-) False CI01000075_00307523_00328194
TU327902 other downstream 756507 320510 ~ 321275 (-) True G289113
TU327862 other downstream 800960 276353 ~ 278540 (-) True CI01000075_00275752_00278496
TU327813 other downstream 964895 108703 ~ 114605 (-) True G289036
TU328267 other upstream 412596 1492323 ~ 1515938 (-) True G289427

Expression Profile