RNA id: TCONS_00018076


Basic Information

Item Value
RNA id TCONS_00018076
length 1090
RNA type processed_transcript
GC content 0.45
exon number 5
gene id XLOC_009187
representative True

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 21521803 ~ 21540276 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

tagTTGACTTCACTCAGGCCTACACGAGCAGCGTCTTCCTTCGGATTTGTTTGGATCATTTTTGATGGCAAAAcagcacaaatgttttaaatTTCCTCTGCCTGCACCTGAGGCCCTCAAGATCTTAGAAGAAGAGGATCACGTGTTTCTCTTCTGGAAGGGGCTTTGAGGTGTATGTGCATGACAGTGTCACCAACTCCACCAAGTGTTTAGGCAACACAACAGAGACGTTCTTCAGAATCAACAGCCTGCTGGCAGGTCATAACTACACGTTCTCGGTGCGGGCGCGATGTCTACTCAGTAACCAGCTTTGTGTAGAGTCAGCGGTGTTGTTATGTGATGAACTGGGCAAAGCAGCAGgGCAGAATGATGCAGCGTCTCAGTCGGGTAAATCGGAGGACATGGCAGCTATTGTGGTGCCAGTGTTGTTCCTGCTGTTAGTGGGTGTGTGTGGAGGCCTGGTGGTGCTTTACCTCAGACATCGTCGCCTACAGCACAGCTTCACTGCCTTCGCTAACAGCCACTACAACTCTCGTCTGGGCTCTGCTATTTTCTCCTCAGGAGATGAGCTGGgtgatgatgatgaagacgcTCCTATAATCAGTAGTTTTTCAGATGACGTTCCGATGGTCATTGCGTAGCTGGACAAACCTTTCTCTTCTCCTCCTTCACTTTCACTCCACAACCTTATCATATTTTCTTATGTGCTCATCCGGCACACCTTCAAGCTACTCATGACCcctgtcacttaaaaaaaaagctgGATTTGTGTTTCCAGACCCACAGGAAGACAAGAAAGCATGGAGCGAAAGAGATATTTTTGAATATAAGATGCACTTTTTTCGGATgtgcaataacttttttttatatatataatatatgtgggTATTGGACATTGTAGGCATTAACTGAAGCAAACTGTGAAGGAGTTGGTCAGCtgatcagcacacacacaccgacCCAACTAGGAAAAGACCCTTATTGTACAACAAAGTCTCACATGAGCATTACATTTTGCTTAAAGCCAAAACAAGCACCTAGATATGGGTACATCagtgcaaaaacacacacaaaagaagagtaaaaaaaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000155858

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00019151 lncRNA downstream 14267 21493852 ~ 21507536 (-) False XLOC_009186
TCONS_00018823 lncRNA downstream 14315 21495320 ~ 21507488 (-) True XLOC_009186
TCONS_00019150 lncRNA downstream 152242 21364961 ~ 21369561 (-) False XLOC_009185
TCONS_00019146 lncRNA downstream 152301 21355581 ~ 21369502 (-) False XLOC_009185
TCONS_00019148 lncRNA downstream 152301 21358364 ~ 21369502 (-) False XLOC_009185
TCONS_00018083 lncRNA upstream 264838 21805114 ~ 21813448 (-) True XLOC_009192
TCONS_00018093 lncRNA upstream 360030 21900306 ~ 21904226 (-) True XLOC_009195
TCONS_00019152 lncRNA upstream 620649 22160925 ~ 22161978 (-) True XLOC_009198
TCONS_00019153 lncRNA upstream 1048228 22588504 ~ 22594885 (-) True XLOC_009202
TCONS_00019154 lncRNA upstream 1604678 23144954 ~ 23154260 (-) False XLOC_009205
TCONS_00018075 mRNA downstream 282387 21220744 ~ 21239416 (-) True XLOC_009184
TCONS_00018074 mRNA downstream 356566 21157585 ~ 21165237 (-) True XLOC_009183
TCONS_00018072 mRNA downstream 366146 21137046 ~ 21155657 (-) False XLOC_009182
TCONS_00018073 mRNA downstream 366162 21137153 ~ 21155641 (-) True XLOC_009182
TCONS_00018070 mRNA downstream 389323 21113965 ~ 21132480 (-) False XLOC_009181
TCONS_00018077 mRNA upstream 734 21541010 ~ 21669618 (-) True XLOC_009188
TCONS_00018078 mRNA upstream 133178 21673454 ~ 21678634 (-) True XLOC_009189
TCONS_00018079 mRNA upstream 144159 21684435 ~ 21692630 (-) True XLOC_009190
TCONS_00018080 mRNA upstream 154112 21694388 ~ 21702317 (-) True XLOC_009191
TCONS_00018081 mRNA upstream 239405 21779681 ~ 21837515 (-) False XLOC_009192
TCONS_00018069 other downstream 412195 21079826 ~ 21109608 (-) True XLOC_009180
TCONS_00018066 other downstream 543555 20960069 ~ 20978248 (-) True XLOC_009178
TCONS_00018065 other downstream 565349 20948693 ~ 20956454 (-) True XLOC_009177
TCONS_00018048 other downstream 691678 20828421 ~ 20830125 (-) True XLOC_009174
TCONS_00018047 other downstream 710392 20809709 ~ 20811411 (-) True XLOC_009173
TCONS_00018099 other upstream 720605 22260881 ~ 22260997 (-) True XLOC_009200
TCONS_00018101 other upstream 1180489 22720765 ~ 22720881 (-) True XLOC_009203
TCONS_00018102 other upstream 1414741 22955017 ~ 22955132 (-) True XLOC_009204
TCONS_00018142 other upstream 2618677 24158953 ~ 24159067 (-) True XLOC_009227
TCONS_00018151 other upstream 3368118 24908394 ~ 24908479 (-) True XLOC_009234

Expression Profile

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