RNA id: TCONS_00018102


Basic Information

Item Value
RNA id TCONS_00018102
length 116
RNA type rRNA
GC content 0.50
exon number 1
gene id XLOC_009204
representative True

Chromosome Information

Item Value
chromosome id NC_007126.7
NCBI id CM002899.2
chromosome length 48040578
location 22955017 ~ 22955132 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TGCCACAGCCTTAtcatcctgcagcccaagaccagttacccACTGAAGTTAAGCATGGCTGAGCctgtcagtacttggatgggtgTCCACATAGGAAAgataggttgctgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000178203

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00019153 lncRNA downstream 360132 22588504 ~ 22594885 (-) True XLOC_009202
TCONS_00019152 lncRNA downstream 793039 22160925 ~ 22161978 (-) True XLOC_009198
TCONS_00018093 lncRNA downstream 1050791 21900306 ~ 21904226 (-) True XLOC_009195
TCONS_00018083 lncRNA downstream 1141569 21805114 ~ 21813448 (-) True XLOC_009192
TCONS_00018823 lncRNA downstream 1447529 21495320 ~ 21507488 (-) True XLOC_009186
TCONS_00019154 lncRNA upstream 189822 23144954 ~ 23154260 (-) False XLOC_009205
TCONS_00019155 lncRNA upstream 193602 23148734 ~ 23154254 (-) True XLOC_009205
TCONS_00018104 lncRNA upstream 245643 23200775 ~ 23206583 (-) True XLOC_009206
TCONS_00018118 lncRNA upstream 533504 23488636 ~ 23495610 (-) False XLOC_009213
TCONS_00018119 lncRNA upstream 537263 23492395 ~ 23495574 (-) True XLOC_009213
TCONS_00018100 mRNA downstream 650824 22302724 ~ 22304193 (-) True XLOC_009201
TCONS_00018098 mRNA downstream 703928 22164549 ~ 22251089 (-) True XLOC_009199
TCONS_00018097 mRNA downstream 807157 22135987 ~ 22147860 (-) True XLOC_009197
TCONS_00018096 mRNA downstream 815451 22133839 ~ 22139566 (-) False XLOC_009197
TCONS_00018095 mRNA downstream 885910 22047004 ~ 22069107 (-) True XLOC_009196
TCONS_00018103 mRNA upstream 245085 23200217 ~ 23206562 (-) False XLOC_009206
TCONS_00018105 mRNA upstream 316730 23271862 ~ 23342752 (-) True XLOC_009207
TCONS_00018106 mRNA upstream 413888 23369020 ~ 23376541 (-) True XLOC_009208
TCONS_00018107 mRNA upstream 427067 23382199 ~ 23420170 (-) False XLOC_009209
TCONS_00018108 mRNA upstream 428115 23383247 ~ 23420079 (-) True XLOC_009209
TCONS_00018101 other downstream 234136 22720765 ~ 22720881 (-) True XLOC_009203
TCONS_00018099 other downstream 694020 22260881 ~ 22260997 (-) True XLOC_009200
TCONS_00018076 other downstream 1414741 21521803 ~ 21540276 (-) True XLOC_009187
TCONS_00018069 other downstream 1845409 21079826 ~ 21109608 (-) True XLOC_009180
TCONS_00018066 other downstream 1976769 20960069 ~ 20978248 (-) True XLOC_009178
TCONS_00018142 other upstream 1203821 24158953 ~ 24159067 (-) True XLOC_009227
TCONS_00018151 other upstream 1953262 24908394 ~ 24908479 (-) True XLOC_009234
TCONS_00018157 other upstream 2129689 25084821 ~ 25093717 (-) False XLOC_009240
TCONS_00018169 other upstream 2283357 25238489 ~ 25268641 (-) False XLOC_009244
TCONS_00018173 other upstream 2323713 25278845 ~ 25284045 (-) True XLOC_009245