RNA id: TU473791



Basic Information


Item Value
RNA id TU473791
length 252
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G412480
representative True

Chromosome Information


Item Value
chromosome id CI01000300
NCBI id null
chromosome length 11740502
location 6134482 ~ 6134733 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GCTTTGCATTGCACTTGGTGATGTAAGGCTTGGATGCAGCTGCTCAGCCATGGAAACCCATTCCATGAAGCTCTCTACGCACTGTTCTTGAGCTAATCTGAAGGCCACACAAAGTTTGGAGGTCTGTAGCTAATGACTCTGCAGAAAGTTGGCGACTTCTGCACACTGTGCGCCTCAGCATGCGCTGACCCCGCTCTGTGATTTTACGTGGCCTACCACTTCGTGGCTGAGTTGCTGTTGTTCCCAATTGCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU473746 lncRNA downstream 7609 6048237 ~ 6126873 (-) True G412436
TU473758 lncRNA downstream 39598 6094555 ~ 6094884 (-) True G412448
TU473682 lncRNA downstream 157268 5976819 ~ 5977214 (-) True G412376
TU473641 lncRNA downstream 197186 5936653 ~ 5937296 (-) True G412342
TU473730 lncRNA downstream 224858 5909424 ~ 5909624 (-) True G412421
TU473813 lncRNA upstream 26151 6160884 ~ 6161388 (-) True G412502
TU473828 lncRNA upstream 44969 6179702 ~ 6180110 (-) True G412517
TU473832 lncRNA upstream 49051 6183784 ~ 6184130 (-) True G412521
TU473839 lncRNA upstream 55278 6190011 ~ 6190461 (-) True G412528
TU473861 lncRNA upstream 74881 6209614 ~ 6210070 (-) True G412550
CI01000300_06039087_06039798.mRNA mRNA downstream 93612 6038932 ~ 6040870 (-) True CI01000300_06039087_06039798
CI01000300_05982822_06013144.mRNA mRNA downstream 121338 5982379 ~ 6013144 (-) True CI01000300_05982822_06013144
CI01000300_05966800_05976695.mRNA mRNA downstream 157787 5966112 ~ 5976695 (-) True CI01000300_05966800_05976695
CI01000300_05962858_05963880.mRNA mRNA downstream 170356 5962834 ~ 5964126 (-) True CI01000300_05962858_05963880
CI01000300_05956128_05961938.mRNA mRNA downstream 172544 5956014 ~ 5961938 (-) True CI01000300_05956128_05961938
CI01000300_06282739_06327586.mRNA mRNA upstream 148006 6282739 ~ 6327586 (-) True CI01000300_06282739_06327586
CI01000300_06347127_06393685.mRNA mRNA upstream 212204 6346937 ~ 6393685 (-) True CI01000300_06347127_06393685
CI01000300_06434048_06444297.mRNA mRNA upstream 298956 6433689 ~ 6444297 (-) True CI01000300_06434048_06444297
CI01000300_06445229_06453282.mRNA mRNA upstream 310426 6445159 ~ 6453282 (-) True CI01000300_06445229_06453282
CI01000300_06557191_06577750.mRNA mRNA upstream 422278 6557011 ~ 6578140 (-) True CI01000300_06557191_06577750
TU473685 other downstream 373293 5711685 ~ 5761189 (-) True G412378
TU472166 other downstream 1739361 4390320 ~ 4395121 (-) True G411012
TU471625 other downstream 2052380 4080204 ~ 4082102 (-) True G410508
TU471627 other downstream 2053943 4076764 ~ 4080539 (-) True CI01000300_04075307_04079312
TU471599 other downstream 2326275 3801139 ~ 3808207 (-) True G410498
TU473866 other upstream 80187 6214920 ~ 6215579 (-) True G412555
TU474008 other upstream 518265 6652998 ~ 6690333 (-) True G412681
TU474529 other upstream 2011799 8146532 ~ 8146889 (-) True G413140
TU475129 other upstream 2834715 8969448 ~ 8976000 (-) True G413664
TU476061 other upstream 3523316 9658049 ~ 9660805 (-) False G414498

Expression Profile