RNA id: TU511033


Basic Information

Item Value
RNA id TU511033
length 303
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G445184
representative True

Chromosome Information

Item Value
chromosome id CI01000313
NCBI id null
chromosome length 2068795
location 1605148 ~ 1605450 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

NNNNGCGCATGCACAGAAAACCAGCCGTCATAGCGCGTGTACTGAACTGAATTATCTGTAGCGTCTTATTGCGTTTAAAGTGTCAAAACACTCTAGGTTCACATAAACAGGCTTTGTCTTAAGTGAATGTATCTGGGAGGAAATCGTGTAGGTTTATCAGTATATTCGATCCATGCATTAGGCTATTGTAAATCTTAAAGTGCCAGCCTAATAAAACAATCAGCAGAATCAGTATACGTTTTATTCATACAGTGAAAAATATGCAGTTTTATTTTTTAATTTGATTATTATGTTTCTTACTTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU511032 lncRNA downstream 884 1603938 ~ 1604264 (-) True G445183
TU511030 lncRNA downstream 3159 1601744 ~ 1601989 (-) True CI01000313_01602067_01603268
TU510976 lncRNA downstream 44547 1560107 ~ 1560601 (-) True G445134
TU510991 lncRNA downstream 47549 1557383 ~ 1557599 (-) True G445148
TU510968 lncRNA downstream 121759 1483091 ~ 1483389 (-) True G445126
TU510970 lncRNA upstream 109505 1714955 ~ 1716525 (-) True G445128
TU511052 lncRNA upstream 127610 1733060 ~ 1733750 (-) True G445203
TU511067 lncRNA upstream 193594 1799044 ~ 1799273 (-) True G445216
TU511091 lncRNA upstream 224064 1829514 ~ 1831311 (-) True G445233
TU511097 lncRNA upstream 234362 1839812 ~ 1840023 (-) True G445239
CI01000313_01602067_01603268.mRNA mRNA downstream 1880 1601944 ~ 1603268 (-) False CI01000313_01602067_01603268
CI01000313_01502545_01526050.mRNA mRNA downstream 79098 1502545 ~ 1526050 (-) True CI01000313_01502545_01526050
CI01000313_01249763_01250659.mRNA mRNA downstream 354489 1249631 ~ 1250659 (-) True CI01000313_01249763_01250659
CI01000313_01140265_01183820.mRNA mRNA downstream 420819 1139036 ~ 1184329 (-) True CI01000313_01140265_01183820
CI01000313_01063333_01083888.mRNA mRNA downstream 521260 1063259 ~ 1083888 (-) True CI01000313_01063333_01083888
CI01000313_01616695_01623806.mRNA mRNA upstream 9953 1615403 ~ 1623806 (-) True CI01000313_01616695_01623806
CI01000313_01653800_01671609.mRNA mRNA upstream 46952 1652402 ~ 1671609 (-) True CI01000313_01653800_01671609
CI01000313_01677464_01683934.mRNA mRNA upstream 71048 1676498 ~ 1683934 (-) True CI01000313_01677464_01683934
CI01000313_01704439_01705320.mRNA mRNA upstream 98880 1704330 ~ 1705320 (-) True CI01000313_01704439_01705320
CI01000313_01757085_01758655.mRNA mRNA upstream 151635 1757085 ~ 1758961 (-) True CI01000313_01757085_01758655
TU510647 other downstream 615856 989167 ~ 989292 (-) True G444832
TU510506 other downstream 1205052 397607 ~ 400096 (-) False G444714
TU510507 other downstream 1205524 397607 ~ 399624 (-) True G444714
TU510429 other downstream 1231684 371520 ~ 373464 (-) True G444653

Expression Profile