RNA id: TU510970


Basic Information

Item Value
RNA id TU510970
length 771
lncRNA type antisense_over
GC content 0.41
exon number 2
gene id G445128
representative True

Chromosome Information

Item Value
chromosome id CI01000313
NCBI id null
chromosome length 2068795
location 1714955 ~ 1716525 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TTGACAAGAGGAGAAACTGTACTGAATTAATACACATGATATTATTTCAGTGTTTCAATAATATACTATAATAAGTGAGAGCAGAGATTACATAGTTCAATTCTTAATAAAATAAAGCATCCAGTTATTCAGTCAAGTTGAAAACATTCTGTGTGGGCCATTTGTTTATGAAATGAAATGTAATGTCTAGGTTCGCCAGTCTCAGTCATCATGTTTAAGTTTTCTGATTTTGCCCTCATGGCGACTGATCTCCTGTTGTAATCTCTCAATTTCCTTCTTGTGGTGGTCAATCTCATCCTGGTGGTGTCTTCTTAGAGCAGCTAATTGTTCTTGCTCCTTTCTCCTGTGTGTTAGCGAGGAAGAATAAGACATGAAATATCTTTTTCAGCGCATGAAAGACTGCGAGCTTTACAACTGCACGTGACAGAATCAAAGAGGGCTGATCAACACATGTAATCAGTAGAGATCTAGTGTGATAGATGAAATTCACAATGGGATCAAGCAAAACCACTCACTTGAAGTACATCTCCTCCTCAGCAGCCTGTTTCTTGCCAAACGCACCTCCTGCCTCCCTTATTGTACCTCCACCGCCGCCTCCTTTCCCAGCACCTTTACCCAATTCTCCTAGCTTTATCTGGTCAGACGACATCCTGATCTGTGTGGCCAAAAACTTCCTTATATTAGGATTTAGAAACCTCGCCATTCTCTCTTCATGTGCTCATGCATGCACTGACATGAACGTGCTCTCCTGTCTCCGTAGTCTCAAAAACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU511033 lncRNA downstream 109505 1605148 ~ 1605450 (-) True G445184
TU511032 lncRNA downstream 110691 1603938 ~ 1604264 (-) True G445183
TU511030 lncRNA downstream 112966 1601744 ~ 1601989 (-) True CI01000313_01602067_01603268
TU510976 lncRNA downstream 154354 1560107 ~ 1560601 (-) True G445134
TU510991 lncRNA downstream 157356 1557383 ~ 1557599 (-) True G445148
TU511052 lncRNA upstream 16535 1733060 ~ 1733750 (-) True G445203
TU511067 lncRNA upstream 82519 1799044 ~ 1799273 (-) True G445216
TU511091 lncRNA upstream 112989 1829514 ~ 1831311 (-) True G445233
TU511097 lncRNA upstream 123287 1839812 ~ 1840023 (-) True G445239
TU511098 lncRNA upstream 124830 1841355 ~ 1841537 (-) True G445240
CI01000313_01704439_01705320.mRNA mRNA downstream 9635 1704330 ~ 1705320 (-) True CI01000313_01704439_01705320
CI01000313_01677464_01683934.mRNA mRNA downstream 31021 1676498 ~ 1683934 (-) True CI01000313_01677464_01683934
CI01000313_01653800_01671609.mRNA mRNA downstream 43346 1652402 ~ 1671609 (-) True CI01000313_01653800_01671609
CI01000313_01616695_01623806.mRNA mRNA downstream 91149 1615403 ~ 1623806 (-) True CI01000313_01616695_01623806
CI01000313_01602067_01603268.mRNA mRNA downstream 111687 1601944 ~ 1603268 (-) False CI01000313_01602067_01603268
CI01000313_01757085_01758655.mRNA mRNA upstream 40560 1757085 ~ 1758961 (-) True CI01000313_01757085_01758655
CI01000313_01759780_01760685.mRNA mRNA upstream 42716 1759241 ~ 1760685 (-) True CI01000313_01759780_01760685
CI01000313_01771461_01775597.mRNA mRNA upstream 54873 1771398 ~ 1775597 (-) True CI01000313_01771461_01775597
CI01000313_01860321_01864056.mRNA mRNA upstream 143726 1860251 ~ 1864898 (-) True CI01000313_01860321_01864056
CI01000313_01896011_01900531.mRNA mRNA upstream 179366 1895891 ~ 1901030 (-) True CI01000313_01896011_01900531
TU510647 other downstream 725663 989167 ~ 989292 (-) True G444832
TU510506 other downstream 1314859 397607 ~ 400096 (-) False G444714
TU510507 other downstream 1315331 397607 ~ 399624 (-) True G444714
TU510429 other downstream 1341491 371520 ~ 373464 (-) True G444653

Expression Profile