RNA id: CI01180000_08007547_08008834.mRNA



Basic Information


Item Value
RNA id CI01180000_08007547_08008834.mRNA
length 1266
RNA type mRNA
GC content 0.46
exon number 2
gene id CI01180000_08007547_08008834
representative True

Chromosome Information


Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 8006735 ~ 8008856 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTACCTAGAAGCTTGCGTGAAATGAATTCCCCTGTTTACTCTCTCTCAAATAACAGCATATCTTCCTTTTCCGGCACGAACTGCAGCAGGTGCCCAGGAGACCTCGTCATCACAGGCTCTGATTCATGCCTGTGCCACATAGCTGCCATCCCAGAAGGCCGAGCAAAAGCAGATGCCAGCAGAGAAACATTGACAGCAACTGTATCTCTGGCCGTGGTGCTAACAGCCTCCATCAGCACCAGGAACACTATGCCAGGGGTCATATCCCACCGGGACAAGCTACACTCACTCTCTCACTCGGTTAATGGGGAGCGGCTTCCCGCAATCAGCAGCCCTAACCTTGTGTACACAGGCAGGCGTCCATGTAGAGGCCAGCGGCCGCAGGGAGGGGAGAAAATCGCCTGTTCCCAGCACTTAGCGGGCAAAACCAAGCGCCTGTCACATACGGTGTAAGGGAAAGCATGAGGTGGGTGTGCACCTGTAGCACTCACTATGTGTGTGTTTGTGTGTACTTGTTCAACTATCTTTGTGAGGACCAGTTTGAGTTTTAGACCATCAGAGTGAGGACAAAGAGAATAAAGTGAGGACATTTTGGCCGGTCCACACTTTCAGAGACCCCTCTAAAGGCCTGTTTGAGGGACTTGATTTTAGGAAAAAGGTTATAATTAGGTTAAGGGAAGACTCAAAGAAGACTCTCTCTCTCTCTCTCTCTCTCTCTATCTGTGTGTGTGTGCGCACGTGTTTTTGTGACATATCAGGACACAAATTTGTATAATGACATGGGTATGACATAGGTATTACAAGGAGAGGGTGACTAATGAGGACATTGCCCCATGTCCCCATTTTTCAAAAGGCTTATAAATCATACAGAATTAGTTTTTTTGAGAAAGTAAAAATGTGCACAGTTTTCTGTGATGGGTAGGTTTAGGGGTAAGGGTAGTGTAGGGCGATAGAAAATACGGTTTGTACAGTATAAAAACCATTATGCCTATAGAATGTCCCACAATTCACAAAAACAAGCGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGATTGTTTGAAAGAAAGCTTGTGGGTCTCTGGTTACCCTCCTGAATTGCGAGTGCACAAACATCACTACTCTTGAGCCTAAATAGGATTCCCATGATTACTCATCTCACCTTACTCTAGTATCTGAGGTTCTTGCTTTACAAAACAAACACAAACTCAAGCATAAAGATGCTCTGAGTATGAACCCAAACTCACAGTGTGAAACCTAAAATAAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU805488 lncRNA downstream 33530 7969963 ~ 7973205 (-) True G684200
TU805477 lncRNA downstream 88570 7917890 ~ 7918165 (-) True G684189
TU805474 lncRNA downstream 91421 7914706 ~ 7915314 (-) True G684186
TU805473 lncRNA downstream 92381 7914057 ~ 7914354 (-) True G684185
TU805472 lncRNA downstream 94236 7912209 ~ 7912499 (-) True G684184
TU805534 lncRNA upstream 150460 8159316 ~ 8163522 (-) True G684234
TU805531 lncRNA upstream 160711 8169567 ~ 8175328 (-) True G684231
TU805571 lncRNA upstream 189575 8198431 ~ 8198654 (-) True G684265
TU805578 lncRNA upstream 207449 8216305 ~ 8216515 (-) True G684272
TU805585 lncRNA upstream 217654 8226510 ~ 8226920 (-) True G684279
CI01180000_07995410_08004464.mRNA mRNA downstream 1958 7995187 ~ 8004777 (-) True CI01180000_07995410_08004464
CI01180000_07958912_07969452.mRNA mRNA downstream 37283 7958739 ~ 7969452 (-) True CI01180000_07958912_07969452
CI01180000_07935855_07937319.mRNA mRNA downstream 69158 7935713 ~ 7937577 (-) True CI01180000_07935855_07937319
CI01180000_07713320_07727939.mRNA mRNA downstream 278535 7712374 ~ 7728200 (-) True CI01180000_07713320_07727939
CI01180000_07696310_07709917.mRNA mRNA downstream 296818 7696310 ~ 7709917 (-) True CI01180000_07696310_07709917
CI01180000_08123227_08149912.mRNA mRNA upstream 114244 8123100 ~ 8149912 (-) True CI01180000_08123227_08149912
CI01180000_08176665_08187246.mRNA mRNA upstream 167768 8176624 ~ 8187246 (-) True CI01180000_08176665_08187246
CI01180000_08512710_08623387.mRNA mRNA upstream 503854 8512710 ~ 8623387 (-) True CI01180000_08512710_08623387
CI01180000_08700470_08707817.mRNA mRNA upstream 690984 8699840 ~ 8707817 (-) True CI01180000_08700470_08707817
CI01180000_08732856_08740755.mRNA mRNA upstream 723702 8732558 ~ 8741445 (-) True CI01180000_08732856_08740755
TU805466 other downstream 95527 7910761 ~ 7911208 (-) False G684182
TU805357 other downstream 423932 7579404 ~ 7582803 (-) True G684080
TU805347 other downstream 481081 7506890 ~ 7525654 (-) True G684071
TU805291 other downstream 593603 7403147 ~ 7413132 (-) False G684018
TU805835 other upstream 713837 8722693 ~ 8723867 (-) True G684493
TU806323 other upstream 1889568 9898424 ~ 9901388 (-) True G684929
TU807544 other upstream 3332760 11341616 ~ 11343496 (-) True G686052

Expression Profile