RNA id: TU805477


Basic Information

Item Value
RNA id TU805477
length 276
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G684189
representative True

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 7917890 ~ 7918165 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTCTAATCAGAATCATAATAAAAGAGCAGAGAAATGTCAGAGAGAAATTATCCGTGGATTAACCATCCTAGCCAATGAACCTCAGAGGAAACCAATGAATTCAGAACAATCGCATACAACATACTGTGTCTTTTTGTGTGTGAGGAGCTTAAATCTGAAATGACGGTTCTTTAATCTTCATTTTCAACAGATTCTAGGATAAAGGTAAAGTATTATTCTGGGTTACAAGTTAAGCTTAATCGCAACACCTGTGGTGTAACGTTAATTTCAACTTAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU805474 lncRNA downstream 2576 7914706 ~ 7915314 (-) True G684186
TU805473 lncRNA downstream 3536 7914057 ~ 7914354 (-) True G684185
TU805472 lncRNA downstream 5391 7912209 ~ 7912499 (-) True G684184
TU805471 lncRNA downstream 6115 7911563 ~ 7911775 (-) True G684183
TU805463 lncRNA downstream 6755 7910829 ~ 7911135 (-) True G684182
TU805488 lncRNA upstream 51798 7969963 ~ 7973205 (-) True G684200
TU805508 lncRNA upstream 87786 8005951 ~ 8024223 (-) True G684215
TU805534 lncRNA upstream 241151 8159316 ~ 8163522 (-) True G684234
TU805531 lncRNA upstream 251402 8169567 ~ 8175328 (-) True G684231
TU805571 lncRNA upstream 280266 8198431 ~ 8198654 (-) True G684265
CI01180000_07713320_07727939.mRNA mRNA downstream 189690 7712374 ~ 7728200 (-) True CI01180000_07713320_07727939
CI01180000_07696310_07709917.mRNA mRNA downstream 207973 7696310 ~ 7709917 (-) True CI01180000_07696310_07709917
CI01180000_07691853_07694359.mRNA mRNA downstream 223525 7691756 ~ 7694365 (-) True CI01180000_07691853_07694359
CI01180000_07664300_07675535.mRNA mRNA downstream 242355 7663854 ~ 7675535 (-) True CI01180000_07664300_07675535
CI01180000_07634809_07642632.mRNA mRNA downstream 274871 7633985 ~ 7643019 (-) True CI01180000_07634809_07642632
CI01180000_07935855_07937319.mRNA mRNA upstream 17548 7935713 ~ 7937577 (-) True CI01180000_07935855_07937319
CI01180000_07958912_07969452.mRNA mRNA upstream 40574 7958739 ~ 7969452 (-) True CI01180000_07958912_07969452
CI01180000_07995410_08004464.mRNA mRNA upstream 77022 7995187 ~ 8004777 (-) True CI01180000_07995410_08004464
CI01180000_08007547_08008834.mRNA mRNA upstream 88570 8006735 ~ 8008856 (-) True CI01180000_08007547_08008834
CI01180000_08123227_08149912.mRNA mRNA upstream 204935 8123100 ~ 8149912 (-) True CI01180000_08123227_08149912
TU805466 other downstream 6682 7910761 ~ 7911208 (-) False G684182
TU805357 other downstream 335087 7579404 ~ 7582803 (-) True G684080
TU805347 other downstream 392236 7506890 ~ 7525654 (-) True G684071
TU805291 other downstream 504758 7403147 ~ 7413132 (-) False G684018
TU805835 other upstream 804528 8722693 ~ 8723867 (-) True G684493
TU806323 other upstream 1980259 9898424 ~ 9901388 (-) True G684929
TU807544 other upstream 3423451 11341616 ~ 11343496 (-) True G686052

Expression Profile