RNA id: TU805471


Basic Information

Item Value
RNA id TU805471
length 213
lncRNA type inter_gene
GC content 0.73
exon number 1
gene id G684183
representative True

Chromosome Information

Item Value
chromosome id CI01180000
NCBI id null
chromosome length 11503085
location 7911563 ~ 7911775 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CGCCCTCCCGCGGCCGCCCCCGCTCCCGCGCCCCAGCAGCAGCCGTCATCCAAGCGGCGCCGTGGAGCCGGTCGTGGTCAGGGTGCCCAGCCCGTCCTGCCCGCCCCCAAGAAGAAGGGCGGCAAGGCCAAGTCCAAGAGGCCCTAGGACGGGCGACCCGGAGATGGAGGGGACTGCCCTTCAGGAGATGGTGACCGCACCACTCCTTCCCCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU805463 lncRNA downstream 428 7910829 ~ 7911135 (-) True G684182
TU805457 lncRNA downstream 13472 7897887 ~ 7898091 (-) True G684176
TU805452 lncRNA downstream 20919 7890421 ~ 7890644 (-) True G684171
TU805449 lncRNA downstream 24598 7886733 ~ 7886965 (-) True G684168
TU805446 lncRNA downstream 32154 7879180 ~ 7879409 (-) True G684165
TU805472 lncRNA upstream 434 7912209 ~ 7912499 (-) True G684184
TU805473 lncRNA upstream 2282 7914057 ~ 7914354 (-) True G684185
TU805474 lncRNA upstream 2931 7914706 ~ 7915314 (-) True G684186
TU805477 lncRNA upstream 6115 7917890 ~ 7918165 (-) True G684189
TU805488 lncRNA upstream 58188 7969963 ~ 7973205 (-) True G684200
CI01180000_07713320_07727939.mRNA mRNA downstream 183363 7712374 ~ 7728200 (-) True CI01180000_07713320_07727939
CI01180000_07696310_07709917.mRNA mRNA downstream 201646 7696310 ~ 7709917 (-) True CI01180000_07696310_07709917
CI01180000_07691853_07694359.mRNA mRNA downstream 217198 7691756 ~ 7694365 (-) True CI01180000_07691853_07694359
CI01180000_07664300_07675535.mRNA mRNA downstream 236028 7663854 ~ 7675535 (-) True CI01180000_07664300_07675535
CI01180000_07634809_07642632.mRNA mRNA downstream 268544 7633985 ~ 7643019 (-) True CI01180000_07634809_07642632
CI01180000_07935855_07937319.mRNA mRNA upstream 23938 7935713 ~ 7937577 (-) True CI01180000_07935855_07937319
CI01180000_07958912_07969452.mRNA mRNA upstream 46964 7958739 ~ 7969452 (-) True CI01180000_07958912_07969452
CI01180000_07995410_08004464.mRNA mRNA upstream 83412 7995187 ~ 8004777 (-) True CI01180000_07995410_08004464
CI01180000_08007547_08008834.mRNA mRNA upstream 94960 8006735 ~ 8008856 (-) True CI01180000_08007547_08008834
CI01180000_08123227_08149912.mRNA mRNA upstream 211325 8123100 ~ 8149912 (-) True CI01180000_08123227_08149912
TU805466 other downstream 355 7910761 ~ 7911208 (-) False G684182
TU805357 other downstream 328760 7579404 ~ 7582803 (-) True G684080
TU805347 other downstream 385909 7506890 ~ 7525654 (-) True G684071
TU805291 other downstream 498431 7403147 ~ 7413132 (-) False G684018
TU805292 other downstream 498431 7403984 ~ 7413132 (-) True G684018
TU805835 other upstream 810918 8722693 ~ 8723867 (-) True G684493
TU806323 other upstream 1986649 9898424 ~ 9901388 (-) True G684929
TU807544 other upstream 3429841 11341616 ~ 11343496 (-) True G686052

Expression Profile