RNA id: TCONS_00021603


Basic Information

Item Value
RNA id TCONS_00021603
length 117
RNA type rRNA
GC content 0.53
exon number 1
gene id XLOC_011077
representative True

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 50935190 ~ 50935306 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ACCCACAGCCACATaactctgcagcccaagactggttactcactgaggCTAAGCAAGACTGAGCCTGGTCagtgcctggatgggagacctcGATAGAAAACTGGGTTGCTGTAGGAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000178512

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00022271 lncRNA downstream 1698089 49236408 ~ 49237101 (-) True XLOC_011064
TCONS_00022270 lncRNA downstream 1713097 49215478 ~ 49222093 (-) True XLOC_011063
TCONS_00022269 lncRNA downstream 1750706 49155860 ~ 49184484 (-) True XLOC_011062
TCONS_00022268 lncRNA downstream 2113845 48820350 ~ 48821345 (-) True XLOC_011061
TCONS_00021584 lncRNA downstream 2518427 48415974 ~ 48416763 (-) True XLOC_011058
TCONS_00022272 lncRNA upstream 143361 51078667 ~ 51080430 (-) False XLOC_011080
TCONS_00022273 lncRNA upstream 143609 51078915 ~ 51080430 (-) True XLOC_011080
TCONS_00021841 lncRNA upstream 940065 51875371 ~ 51884294 (-) False XLOC_011088
TCONS_00021842 lncRNA upstream 962450 51897756 ~ 51947869 (-) False XLOC_011089
TCONS_00021843 lncRNA upstream 1591546 52526852 ~ 52540111 (-) False XLOC_011091
TCONS_00021601 mRNA downstream 16282 50917913 ~ 50918908 (-) True XLOC_011075
TCONS_00021600 mRNA downstream 37303 50889118 ~ 50897887 (-) True XLOC_011074
TCONS_00021597 mRNA downstream 705916 50214819 ~ 50229274 (-) False XLOC_011072
TCONS_00021598 mRNA downstream 705997 50215587 ~ 50229193 (-) True XLOC_011072
TCONS_00021596 mRNA downstream 732132 50183190 ~ 50203058 (-) True XLOC_011071
TCONS_00021605 mRNA upstream 66651 51001957 ~ 51072406 (-) True XLOC_011079
TCONS_00021606 mRNA upstream 149166 51084472 ~ 51151993 (-) True XLOC_011081
TCONS_00021607 mRNA upstream 308991 51244297 ~ 51254694 (-) False XLOC_011082
TCONS_00021608 mRNA upstream 309386 51244692 ~ 51253925 (-) True XLOC_011082
TCONS_00021609 mRNA upstream 331196 51266502 ~ 51271962 (-) False XLOC_011083
TCONS_00021599 other downstream 296404 50638670 ~ 50638786 (-) True XLOC_011073
TCONS_00021592 other downstream 939596 49995478 ~ 49995594 (-) True XLOC_011068
TCONS_00021580 other downstream 2991933 47943143 ~ 47943257 (-) True XLOC_011054
TCONS_00021533 other downstream 4594533 46340543 ~ 46340657 (-) True XLOC_011031
TCONS_00021532 other downstream 4718281 46216808 ~ 46216909 (-) True XLOC_011030
TCONS_00021604 other upstream 25940 50961246 ~ 50961362 (-) True XLOC_011078
TCONS_00021614 other upstream 820086 51755392 ~ 51755506 (-) True XLOC_011087
TCONS_00021617 other upstream 1006524 51941830 ~ 51947781 (-) True XLOC_011089
TCONS_00021634 other upstream 2707514 53642820 ~ 53649995 (-) True XLOC_011102
TCONS_00021635 other upstream 2715596 53650902 ~ 53655539 (-) True XLOC_011103

Expression Profile

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