Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00001842 |
| length | 783 |
| RNA type | mRNA |
| GC content | 0.40 |
| exon number | 4 |
| gene id | XLOC_001154 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007112.7 |
| NCBI id | CM002885.2 |
| chromosome length | 59578282 |
| location | 18841462 ~ 18849029 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0010468 | regulation of gene expression | biological_process |
| GO:0008630 | intrinsic apoptotic signaling pathway in response to DNA damage | biological_process |
| GO:0005575 | cellular_component | cellular_component |
| GO:0046872 | metal ion binding | molecular_function |
| GO:0008270 | zinc ion binding | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-081022-208 | Predicted to enable zinc ion binding activity. Predicted to be involved in intrinsic apoptotic signaling pathway in response to DNA damage and regulation of gene expression. |
| ensembl_id | ENSDART00000109294 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00001837 | lncRNA | downstream | 30149 | 18810891 ~ 18811487 (-) | False | XLOC_001153 |
| TCONS_00001839 | lncRNA | downstream | 30152 | 18810894 ~ 18811484 (-) | True | XLOC_001153 |
| TCONS_00001840 | lncRNA | downstream | 30153 | 18810891 ~ 18811483 (-) | False | XLOC_001153 |
| TCONS_00003392 | lncRNA | downstream | 603696 | 18233995 ~ 18237940 (-) | False | XLOC_001144 |
| TCONS_00003391 | lncRNA | downstream | 603696 | 18233995 ~ 18237940 (-) | False | XLOC_001144 |
| TCONS_00003393 | lncRNA | upstream | 84967 | 18933922 ~ 18936968 (-) | True | XLOC_001155 |
| TCONS_00002942 | lncRNA | upstream | 93444 | 18942399 ~ 18945609 (-) | False | XLOC_001156 |
| TCONS_00003394 | lncRNA | upstream | 94167 | 18943122 ~ 18946851 (-) | False | XLOC_001156 |
| TCONS_00002943 | lncRNA | upstream | 95508 | 18944463 ~ 18945315 (-) | False | XLOC_001156 |
| TCONS_00002944 | lncRNA | upstream | 96412 | 18945367 ~ 18946858 (-) | True | XLOC_001156 |
| TCONS_00001838 | mRNA | downstream | 30119 | 18810891 ~ 18811517 (-) | False | XLOC_001153 |
| TCONS_00001835 | mRNA | downstream | 37717 | 18779168 ~ 18803919 (-) | True | XLOC_001152 |
| TCONS_00001832 | mRNA | downstream | 69395 | 18645348 ~ 18772241 (-) | False | XLOC_001151 |
| TCONS_00001843 | mRNA | upstream | 225371 | 19074326 ~ 19079957 (-) | True | XLOC_001157 |
| TCONS_00001844 | mRNA | upstream | 273965 | 19122920 ~ 19237612 (-) | False | XLOC_001160 |
| TCONS_00001846 | mRNA | upstream | 274655 | 19123610 ~ 19215336 (-) | False | XLOC_001160 |
| TCONS_00001845 | mRNA | upstream | 274655 | 19123610 ~ 19215336 (-) | False | XLOC_001160 |
| TCONS_00001847 | mRNA | upstream | 356242 | 19205197 ~ 19233890 (-) | False | XLOC_001160 |
| TCONS_00001836 | other | downstream | 30152 | 18810891 ~ 18811484 (-) | False | XLOC_001153 |
| TCONS_00001833 | other | downstream | 89172 | 18716178 ~ 18752464 (-) | False | XLOC_001151 |
| TCONS_00001834 | other | downstream | 100018 | 18726359 ~ 18741618 (-) | True | XLOC_001151 |
| TCONS_00001826 | other | downstream | 226662 | 18605635 ~ 18614974 (-) | True | XLOC_001150 |
| TCONS_00001824 | other | downstream | 254438 | 18584948 ~ 18587198 (-) | True | XLOC_001149 |
| TCONS_00001850 | other | upstream | 512250 | 19361205 ~ 19366174 (-) | False | XLOC_001163 |
| TCONS_00001851 | other | upstream | 520042 | 19368997 ~ 19402815 (-) | True | XLOC_001163 |
| TCONS_00001874 | other | upstream | 994279 | 19843234 ~ 19845380 (-) | True | XLOC_001174 |
| TCONS_00001878 | other | upstream | 1632154 | 20481109 ~ 20553129 (-) | False | XLOC_001178 |
| TCONS_00001883 | other | upstream | 1990527 | 20839482 ~ 20878076 (-) | False | XLOC_001182 |
